MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 27342 bp
Accession: NZ_CP010139 Location: 1..27342 Organism: Escherichia coli strain D2 Replicon: plasmid B
Accession: NZ_CP010139 Location: 1..27342 Organism: Escherichia coli strain D2 Replicon: plasmid B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG35_RS25525 () | 214..327 | - | 114 | Protein_0 | transposase domain-containing protein | - |
| RG35_RS25530 () | 366..1439 | + | 1074 | WP_073544447.1 | IS110 family transposase ISEc21 | Transposase |
| RG35_RS25535 () | 1459..1752 | + | 294 | Protein_2 | integrase core domain-containing protein | - |
| RG35_RS25540 () | 1761..1970 | - | 210 | Protein_3 | transposase | - |
| RG35_RS25545 () | 2541..2864 | + | 324 | WP_073544460.1 | hypothetical protein | - |
| RG35_RS27105 () | 2891..3397 | + | 507 | WP_157925459.1 | CS3 fimbrial subunit A | VF |
| RG35_RS25550 () | 3464..4183 | + | 720 | WP_073544461.1 | Chaperone protein caf1M | VF |
| RG35_RS25555 () | 4201..6609 | + | 2409 | WP_073544448.1 | F1 capsule-anchoring protein | VF |
| RG35_RS27110 () | 6774..7095 | + | 322 | Protein_8 | IS3 family transposase IS3H | Transposase |
| RG35_RS25570 () | 7090..8310 | + | 1221 | Protein_9 | Serine protease SepA autotransporter | VF |
| RG35_RS25575 () | 8304..8663 | + | 360 | Protein_10 | IS91 family transposase ISSod25 | Transposase |
| RG35_RS25580 () | 8801..9076 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| RG35_RS25585 () | 9070..9714 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| RG35_RS26775 () | 9951..10019 | + | 69 | Protein_13 | hypothetical protein | - |
| RG35_RS25590 () | 10019..10963 | - | 945 | Protein_14 | translesion error-prone DNA polymerase V subunit UmuC | - |
| RG35_RS25595 () | 10963..11172 | - | 210 | Protein_15 | peptidase | - |
| RG35_RS26780 () | 11148..11258 | + | 111 | Protein_16 | hypothetical protein | - |
| RG35_RS25605 () | 11254..11601 | + | 348 | Protein_17 | DUF2726 domain-containing protein | - |
| RG35_RS25610 () | 11841..12095 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| RG35_RS25620 () | 12333..12407 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| RG35_RS25625 () | 12400..13257 | + | 858 | WP_073544452.1 | incFII family plasmid replication initiator RepA | - |
| RG35_RS25645 () | 14174..14443 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| RG35_RS25650 () | 14440..14721 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG35_RS25655 () | 14812..15294 | + | 483 | WP_032182006.1 | hypothetical protein | - |
| RG35_RS25660 () | 15584..15931 | + | 348 | WP_000142441.1 | hypothetical protein | - |
| RG35_RS25665 () | 15949..16539 | - | 591 | WP_020219166.1 | hypothetical protein | - |
| RG35_RS25670 () | 16536..16796 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| RG35_RS25675 () | 17150..19288 | + | 2139 | WP_000350635.1 | AAA family ATPase | - |
| RG35_RS25680 () | 19450..19866 | - | 417 | WP_077900217.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| RG35_RS25685 () | 19863..20093 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| RG35_RS25690 () | 20399..23518 | + | 3120 | WP_001553851.1 | hypothetical protein | - |
| RG35_RS25695 () | 24085..24791 | - | 707 | Protein_31 | IS1 family transposase IS1S | Transposase |
| RG35_RS25715 () | 25158..25643 | + | 486 | WP_073544457.1 | Transposon Tn10 TetD protein | VF |
| RG35_RS25720 () | 25688..25975 | + | 288 | WP_073544458.1 | hypothetical protein | - |
| RG35_RS25725 () | 26017..26847 | - | 831 | WP_073544459.1 | helix-turn-helix transcriptional regulator | - |
| RG35_RS25730 () | 27219..27329 | - | 111 | WP_072286114.1 | arylsulfatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|