MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64251 bp
Accession: NZ_CP009886 Location: 1..64251 Organism: Xylella fastidiosa strain Hib4 Replicon: plasmid pXF64-HB
Accession: NZ_CP009886 Location: 1..64251 Organism: Xylella fastidiosa strain Hib4 Replicon: plasmid pXF64-HB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFHB_RS13775 () | 954..1601 | + | 648 | WP_088578635.1 | UDP-3-O-acylglucosamine N-acyltransferase | VF |
| XFHB_RS13780 () | 1627..2100 | + | 474 | WP_157293283.1 | hypothetical protein | - |
| XFHB_RS13785 () | 2217..2429 | + | 213 | WP_157293286.1 | hypothetical protein | - |
| XFHB_RS13790 () | 2426..3364 | + | 939 | WP_088578638.1 | zeta toxin family protein | - |
| XFHB_RS13795 () | 3411..8987 | - | 5577 | WP_088578639.1 | DEAD/DEAH box helicase family protein | - |
| XFHB_RS13800 () | 9094..9447 | - | 354 | WP_088578640.1 | hypothetical protein | - |
| XFHB_RS13805 () | 9462..9842 | - | 381 | WP_088578641.1 | hypothetical protein | - |
| XFHB_RS13810 () | 9839..11539 | - | 1701 | WP_088578642.1 | PcfJ domain-containing protein | - |
| XFHB_RS13815 () | 11551..14019 | - | 2469 | WP_088578643.1 | topoisomerase C-terminal repeat-containing protein | - |
| XFHB_RS13820 () | 14179..14634 | + | 456 | WP_088578644.1 | hypothetical protein | VF |
| XFHB_RS13825 () | 14644..15765 | + | 1122 | WP_088578645.1 | conjugal transfer protein TrbA | - |
| XFHB_RS13830 () | 15776..16732 | + | 957 | WP_088578646.1 | DsbC family protein | - |
| XFHB_RS13835 () | 16741..18102 | + | 1362 | WP_088578647.1 | DNA primase | - |
| XFHB_RS13840 () | 18161..20392 | + | 2232 | WP_088578648.1 | hypothetical protein | VF |
| XFHB_RS13845 () | 20392..21756 | + | 1365 | WP_088578649.1 | hypothetical protein | - |
| XFHB_RS13850 () | 21758..22321 | + | 564 | WP_088578650.1 | Phospholipase D | VF |
| XFHB_RS13855 () | 22389..22901 | - | 513 | WP_088578686.1 | hypothetical protein | - |
| XFHB_RS13860 () | 23074..23610 | - | 537 | WP_194955735.1 | hypothetical protein | - |
| XFHB_RS13865 () | 23753..25582 | + | 1830 | Protein_19 | hypothetical protein | - |
| XFHB_RS13870 () | 25899..26387 | + | 489 | WP_088578651.1 | hypothetical protein | - |
| XFHB_RS13875 () | 26514..27080 | - | 567 | WP_088578688.1 | hypothetical protein | - |
| XFHB_RS13880 () | 27080..27349 | - | 270 | WP_088578652.1 | hypothetical protein | VF |
| XFHB_RS13885 () | 27346..28512 | - | 1167 | WP_088578653.1 | Twitching mobility protein | VF |
| XFHB_RS13890 () | 28509..29519 | - | 1011 | WP_088578689.1 | hypothetical protein | VF |
| XFHB_RS13895 () | 29535..29990 | - | 456 | WP_088578654.1 | DotD/TraH family lipoprotein | - |
| XFHB_RS13900 () | 30099..32240 | - | 2142 | WP_088578690.1 | Protein TraI | Relaxase |
| XFHB_RS13905 () | 32301..32600 | - | 300 | WP_157293288.1 | mobilization protein | - |
| XFHB_RS13910 () | 32842..33276 | + | 435 | WP_088578655.1 | hypothetical protein | - |
| XFHB_RS13915 () | 33290..33970 | + | 681 | WP_088578656.1 | AAA family ATPase | - |
| XFHB_RS13920 () | 33963..34655 | + | 693 | WP_088578657.1 | hypothetical protein | - |
| XFHB_RS13925 () | 34805..35902 | - | 1098 | WP_088578658.1 | hypothetical protein | - |
| XFHB_RS13930 () | 36014..36310 | - | 297 | WP_088578659.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFHB_RS13935 () | 36298..36576 | - | 279 | WP_088578660.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| XFHB_RS13940 () | 36858..37142 | + | 285 | WP_088578661.1 | hypothetical protein | - |
| XFHB_RS13945 () | 37252..38493 | + | 1242 | WP_157293290.1 | hypothetical protein | - |
| XFHB_RS13950 () | 38614..39192 | + | 579 | WP_088578662.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| XFHB_RS13955 () | 39125..39433 | - | 309 | WP_088578663.1 | hypothetical protein | - |
| XFHB_RS13960 () | 39592..40311 | - | 720 | WP_088578664.1 | DUF3560 domain-containing protein | - |
| XFHB_RS13970 () | 41051..41329 | - | 279 | WP_088578665.1 | transcriptional regulator | - |
| XFHB_RS13980 () | 41480..42685 | - | 1206 | WP_088578667.1 | ParB/RepB/Spo0J family partition protein | - |
| XFHB_RS13985 () | 42682..43446 | - | 765 | WP_010895252.1 | ParA family protein | - |
| XFHB_RS13990 () | 43734..44084 | + | 351 | WP_088578693.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFHB_RS13995 () | 44081..44404 | + | 324 | WP_088578668.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| XFHB_RS14000 () | 44747..45013 | - | 267 | WP_088578669.1 | hypothetical protein | - |
| XFHB_RS14005 () | 45010..45645 | - | 636 | WP_088578670.1 | AAA family ATPase | - |
| XFHB_RS14010 () | 46489..47328 | - | 840 | WP_088578694.1 | replication initiator protein A | - |
| XFHB_RS14020 () | 49277..50050 | + | 774 | WP_088578672.1 | hypothetical protein | VF |
| XFHB_RS14025 () | 50062..51153 | + | 1092 | WP_088578673.1 | hypothetical protein | VF |
| XFHB_RS14030 () | 51164..52486 | + | 1323 | WP_088578674.1 | conjugal transfer protein TraO | - |
| XFHB_RS14035 () | 52526..53392 | + | 867 | WP_088578675.1 | hypothetical protein | - |
| XFHB_RS14040 () | 53405..53938 | + | 534 | WP_088578676.1 | conjugal transfer protein TraQ | - |
| XFHB_RS14045 () | 53963..54433 | + | 471 | WP_088578677.1 | hypothetical protein | - |
| XFHB_RS14050 () | 54492..55244 | + | 753 | WP_088578678.1 | HNH endonuclease | - |
| XFHB_RS14055 () | 55256..58321 | + | 3066 | WP_088578679.1 | hypothetical protein | VF |
| XFHB_RS14060 () | 58318..59541 | + | 1224 | WP_088578680.1 | conjugal transfer protein TraW | - |
| XFHB_RS14065 () | 59541..60134 | + | 594 | WP_088578681.1 | hypothetical protein | - |
| XFHB_RS14070 () | 60131..62323 | + | 2193 | WP_088578682.1 | DotA/TraY family protein | - |
| XFHB_RS14075 () | 62461..62958 | + | 498 | WP_088578683.1 | hypothetical protein | - |
| XFHB_RS14080 () | 63042..63851 | + | 810 | WP_088578684.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|