MGE detailed information
MGE type: Prophage MGE length: 43100 bp
Accession: NZ_CP009790 Location: 2363203..2406302 Organism: Xylella fastidiosa strain U24d Replicon: chromosome
Accession: NZ_CP009790 Location: 2363203..2406302 Organism: Xylella fastidiosa strain U24d Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFUD_RS11460 () | 2358741..2359307 | - | 567 | WP_004086027.1 | elongation factor P | - |
| XFUD_RS11465 () | 2359411..2360439 | + | 1029 | WP_042463778.1 | EF-P beta-lysylation protein EpmB | - |
| XFUD_RS11470 () | 2360563..2361354 | - | 792 | WP_088371725.1 | RNA methyltransferase | - |
| XFUD_RS11475 () | 2361445..2362272 | + | 828 | WP_010894918.1 | inositol monophosphatase | - |
| XFUD_RS11480 () | 2362442..2363122 | + | 681 | WP_010894919.1 | dethiobiotin synthase | - |
| XFUD_RS11485 () | 2363119..2363526 | + | 408 | WP_010894920.1 | IS91 family transposase ISAzo26 | Transposase |
| XFUD_RS11490 () | 2363846..2364928 | - | 1083 | WP_010894921.1 | phage late control D family protein | - |
| XFUD_RS11495 () | 2364919..2365137 | - | 219 | WP_010893256.1 | tail protein X | - |
| XFUD_RS11500 () | 2365134..2365616 | - | 483 | WP_010893255.1 | phage tail protein | - |
| XFUD_RS11505 () | 2365613..2367832 | - | 2220 | WP_010894922.1 | phage tail tape measure protein | - |
| XFUD_RS11510 () | 2367959..2368246 | - | 288 | WP_010894923.1 | phage tail assembly protein | - |
| XFUD_RS11515 () | 2368249..2368758 | - | 510 | WP_010893252.1 | phage major tail tube protein | - |
| XFUD_RS11520 () | 2368758..2369936 | - | 1179 | WP_042462912.1 | phage tail sheath family protein | - |
| XFUD_RS11525 () | 2370001..2371593 | - | 1593 | WP_010894924.1 | tail fiber domain-containing protein | - |
| XFUD_RS11530 () | 2371601..2372158 | - | 558 | WP_010893249.1 | phage tail protein I | - |
| XFUD_RS11535 () | 2372151..2373044 | - | 894 | WP_010893248.1 | baseplate J/gp47 family protein | - |
| XFUD_RS11540 () | 2373044..2373382 | - | 339 | WP_042462908.1 | GPW/gp25 family protein | - |
| XFUD_RS11545 () | 2373600..2373902 | + | 303 | WP_010894925.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| XFUD_RS11550 () | 2373905..2374306 | + | 402 | WP_010894926.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| XFUD_RS11555 () | 2374375..2374962 | - | 588 | WP_010894927.1 | phage baseplate assembly protein V | - |
| XFUD_RS11560 () | 2374959..2375501 | - | 543 | WP_010894928.1 | hypothetical protein | - |
| XFUD_RS11565 () | 2375477..2375998 | - | 522 | WP_010893241.1 | hypothetical protein | - |
| XFUD_RS11570 () | 2375995..2376318 | - | 324 | WP_042462902.1 | hypothetical protein | - |
| XFUD_RS11575 () | 2376318..2376578 | - | 261 | WP_010893239.1 | hypothetical protein | - |
| XFUD_RS11580 () | 2376596..2378476 | - | 1881 | WP_010893238.1 | phage major capsid protein | - |
| XFUD_RS11585 () | 2378460..2380058 | - | 1599 | WP_010893237.1 | phage portal protein | - |
| XFUD_RS11590 () | 2380055..2380603 | - | 549 | WP_010893236.1 | hypothetical protein | - |
| XFUD_RS11595 () | 2380607..2382559 | - | 1953 | WP_042462898.1 | phage terminase large subunit family protein | - |
| XFUD_RS11600 () | 2382552..2383133 | - | 582 | WP_010893234.1 | terminase small subunit | - |
| XFUD_RS11605 () | 2383264..2383488 | - | 225 | WP_042462892.1 | hypothetical protein | - |
| XFUD_RS11610 () | 2383490..2383951 | - | 462 | WP_042462889.1 | hypothetical protein | - |
| XFUD_RS11615 () | 2383941..2384270 | - | 330 | WP_031338054.1 | phage holin family protein | - |
| XFUD_RS11620 () | 2384263..2384757 | - | 495 | WP_010893231.1 | lysozyme | - |
| XFUD_RS11625 () | 2384724..2385341 | - | 618 | WP_042463593.1 | hypothetical protein | - |
| XFUD_RS11630 () | 2385832..2388363 | - | 2532 | WP_042463422.1 | DNA primase | - |
| XFUD_RS11635 () | 2388466..2389284 | - | 819 | WP_010894930.1 | Bro-N domain-containing protein | - |
| XFUD_RS13585 () | 2389783..2389944 | + | 162 | WP_155115001.1 | hypothetical protein | - |
| XFUD_RS11645 () | 2390072..2390317 | - | 246 | WP_023907050.1 | hypothetical protein | - |
| XFUD_RS11650 () | 2390378..2390626 | - | 249 | WP_010894932.1 | hypothetical protein | - |
| XFUD_RS11655 () | 2390623..2390811 | - | 189 | WP_010894933.1 | hypothetical protein | - |
| XFUD_RS13590 () | 2390865..2391089 | - | 225 | WP_051372715.1 | hypothetical protein | - |
| XFUD_RS13595 () | 2391191..2391496 | + | 306 | WP_023907048.1 | hypothetical protein | - |
| XFUD_RS13600 () | 2391493..2391693 | - | 201 | WP_031338060.1 | Rha family transcriptional regulator | - |
| XFUD_RS11665 () | 2391767..2392537 | + | 771 | WP_010894935.1 | helix-turn-helix transcriptional regulator | - |
| XFUD_RS11670 () | 2392706..2393245 | + | 540 | WP_010894936.1 | hypothetical protein | - |
| XFUD_RS11675 () | 2393282..2393593 | + | 312 | WP_052262873.1 | hypothetical protein | - |
| XFUD_RS13605 () | 2393781..2394236 | + | 456 | WP_010894938.1 | hypothetical protein | - |
| XFUD_RS11685 () | 2394342..2394731 | + | 390 | WP_010894939.1 | hypothetical protein | - |
| XFUD_RS11690 () | 2394728..2395129 | + | 402 | WP_010894940.1 | hypothetical protein | - |
| XFUD_RS11695 () | 2395189..2395671 | - | 483 | WP_042463427.1 | hypothetical protein | - |
| XFUD_RS11705 () | 2395971..2396162 | + | 192 | WP_023907733.1 | hypothetical protein | - |
| XFUD_RS11710 () | 2396186..2396377 | + | 192 | WP_010894942.1 | hypothetical protein | - |
| XFUD_RS11715 () | 2396409..2396606 | + | 198 | WP_010894943.1 | hypothetical protein | - |
| XFUD_RS13610 () | 2396658..2397101 | + | 444 | WP_042463433.1 | hypothetical protein | - |
| XFUD_RS11725 () | 2397098..2398375 | + | 1278 | WP_010894945.1 | DUF2800 domain-containing protein | - |
| XFUD_RS11730 () | 2398375..2398941 | + | 567 | WP_010894946.1 | DUF2815 family protein | - |
| XFUD_RS11735 () | 2399010..2400524 | + | 1515 | WP_010894947.1 | hypothetical protein | - |
| XFUD_RS11740 () | 2400526..2402706 | + | 2181 | WP_010894948.1 | DNA polymerase | - |
| XFUD_RS11745 () | 2402703..2402981 | + | 279 | WP_010893206.1 | VRR-NUC domain-containing protein | - |
| XFUD_RS11750 () | 2402983..2403378 | - | 396 | WP_010894949.1 | hypothetical protein | - |
| XFUD_RS11755 () | 2403463..2404881 | + | 1419 | WP_010894950.1 | DEAD/DEAH box helicase | - |
| XFUD_RS13830 () | 2404878..2405042 | + | 165 | WP_010894951.1 | hypothetical protein | - |
| XFUD_RS11760 () | 2405035..2405283 | + | 249 | WP_023907056.1 | DUF4224 domain-containing protein | - |
| XFUD_RS11765 () | 2405283..2406302 | + | 1020 | WP_010894952.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| XFUD_RS11770 () | 2406623..2406901 | + | 279 | WP_010894953.1 | hypothetical protein | - |
| XFUD_RS11780 () | 2408028..2408892 | + | 865 | Protein_2157 | 30S ribosomal protein S6--L-glutamate ligase | - |
| XFUD_RS11785 () | 2409577..2410254 | + | 678 | WP_010894955.1 | response regulator transcription factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xylella fastidiosa 9a5c | Prophage | TA162 | NC_002488 | 2361169..2404268 | 0 |