MGE detailed information
MGE type: Genomic_island MGE length: 26914 bp
Accession: NZ_CP009769 Location: 3372990..3399903 Organism: Pectobacterium brasiliense strain BC1 Replicon: chromosome
Accession: NZ_CP009769 Location: 3372990..3399903 Organism: Pectobacterium brasiliense strain BC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NC16_RS15315 () | 3369244..3370458 | + | 1215 | WP_039503037.1 | tyrosine-type recombinase/integrase | - |
| NC16_RS15320 () | 3370790..3372382 | + | 1593 | WP_039503039.1 | hypothetical protein | - |
| NC16_RS22770 () | 3372619..3372771 | - | 153 | Protein_2946 | hypothetical protein | - |
| NC16_RS15325 () | 3372990..3376832 | + | 3843 | WP_039503041.1 | hypothetical protein | - |
| NC16_RS15330 () | 3376921..3377892 | - | 972 | WP_039503043.1 | reverse transcriptase family protein | - |
| NC16_RS15335 () | 3377873..3378163 | - | 291 | WP_039503045.1 | Transcriptional regulator ClgR | VF |
| NC16_RS15340 () | 3378214..3378453 | - | 240 | WP_015729936.1 | hypothetical protein | - |
| NC16_RS15345 () | 3379130..3379741 | - | 612 | WP_039503049.1 | inovirus Gp2 family protein | - |
| NC16_RS15350 () | 3380120..3380497 | - | 378 | Protein_2952 | hypothetical protein | - |
| NC16_RS15355 () | 3380507..3381040 | - | 534 | WP_039503051.1 | hypothetical protein | - |
| NC16_RS15360 () | 3381146..3381358 | - | 213 | WP_039503053.1 | helix-turn-helix domain-containing protein | - |
| NC16_RS15365 () | 3381794..3382636 | + | 843 | WP_131547285.1 | hypothetical protein | - |
| NC16_RS15370 () | 3382738..3383613 | + | 876 | WP_039503057.1 | GTPase family protein | - |
| NC16_RS15375 () | 3383698..3384519 | + | 822 | WP_039503058.1 | DUF945 domain-containing protein | - |
| NC16_RS15380 () | 3384745..3385440 | + | 696 | Protein_2958 | DeoR family transcriptional regulator | - |
| NC16_RS15385 () | 3385625..3386194 | + | 570 | WP_039308205.1 | hypothetical protein | - |
| NC16_RS15390 () | 3386230..3386703 | + | 474 | WP_039308202.1 | hypothetical protein | - |
| NC16_RS15395 () | 3386720..3386953 | + | 234 | WP_039503061.1 | membrane protein | - |
| NC16_RS15400 () | 3387041..3387514 | + | 474 | WP_039503063.1 | DNA repair protein RadC | - |
| NC16_RS15405 () | 3387554..3387889 | + | 336 | WP_039503065.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NC16_RS15410 () | 3387959..3388279 | + | 321 | WP_039503067.1 | TA system toxin CbtA family protein | Toxin Detail |
| NC16_RS15415 () | 3388392..3389225 | + | 834 | WP_039503070.1 | DUF4942 domain-containing protein | - |
| NC16_RS15420 () | 3389651..3390469 | - | 819 | WP_131547287.1 | hypothetical protein | - |
| NC16_RS15425 () | 3390916..3391173 | + | 258 | Protein_2967 | DUF4942 domain-containing protein | - |
| NC16_RS15430 () | 3391267..3391497 | + | 231 | WP_039360473.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| NC16_RS15435 () | 3391497..3391901 | + | 405 | WP_039503077.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NC16_RS15440 () | 3392860..3393816 | - | 957 | WP_039464444.1 | 5'-nucleotidase | - |
| NC16_RS22530 () | 3394239..3397553 | - | 3315 | WP_080752716.1 | NERD domain-containing protein | - |
| NC16_RS15455 () | 3397553..3398338 | - | 786 | WP_052325994.1 | hypothetical protein | - |
| NC16_RS15465 () | 3398701..3399903 | - | 1203 | WP_039503082.1 | CmlA/FloR family chloramphenicol efflux MFS transporter | - |
| NC16_RS15470 () | 3400170..3401603 | - | 1434 | WP_039503084.1 | FAD-binding protein | - |
| NC16_RS15475 () | 3401600..3402478 | - | 879 | WP_010681665.1 | TauD/TfdA family dioxygenase | - |
| NC16_RS15480 () | 3402722..3402943 | - | 222 | WP_010300175.1 | acyl carrier protein | - |
| NC16_RS15485 () | 3402962..3404395 | - | 1434 | WP_039503086.1 | AMP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|