MGE detailed information
MGE type: Genomic_island MGE length: 31879 bp
Accession: NZ_CP009685 Location: 912721..944599 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP009685 Location: 912721..944599 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EO53_RS04505 () | 908905..910173 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| EO53_RS04510 () | 910193..911170 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| EO53_RS25595 () | 911506..913758 | - | 2253 | Protein_853 | hypothetical protein | - |
| EO53_RS25600 () | 915144..916517 | + | 1374 | Protein_854 | DUF5507 domain-containing protein | - |
| EO53_RS23450 () | 916881..917090 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| EO53_RS23460 () | 917245..917364 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| EO53_RS25060 () | 917429..922009 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| EO53_RS04560 () | 922373..922702 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| EO53_RS04565 () | 922723..923040 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EO53_RS23510 () | 923078..923278 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| EO53_RS04570 () | 923287..923769 | - | 483 | WP_001407480.1 | RadC family protein | - |
| EO53_RS04575 () | 923778..924236 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| EO53_RS23515 () | 924339..924562 | - | 224 | Protein_863 | DUF905 family protein | - |
| EO53_RS04580 () | 925134..926837 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| EO53_RS04585 () | 926979..927988 | + | 1010 | Protein_865 | arsenic transporter | - |
| EO53_RS04590 () | 928001..928315 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| EO53_RS04595 () | 928540..929007 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| EO53_RS04600 () | 929031..929474 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| EO53_RS04605 () | 929474..929710 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| EO53_RS04610 () | 929751..930452 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| EO53_RS04615 () | 930668..931489 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| EO53_RS04620 () | 931581..932444 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| EO53_RS04625 () | 932799..933170 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| EO53_RS04630 () | 933163..934236 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| EO53_RS04635 () | 934378..934641 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| EO53_RS04640 () | 935001..936617 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| EO53_RS04645 () | 936614..938802 | + | 2189 | Protein_877 | DEAD/DEAH box helicase | - |
| EO53_RS04650 () | 938980..939606 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| EO53_RS04655 () | 939759..941168 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| EO53_RS04660 () | 941297..941509 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| EO53_RS04665 () | 941553..942509 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| EO53_RS04670 () | 942753..943994 | - | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| EO53_RS04675 () | 944775..945257 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| EO53_RS04680 () | 945428..945865 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| EO53_RS04685 () | 945855..946145 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| EO53_RS04690 () | 946207..946548 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| EO53_RS04695 () | 946697..948358 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| EO53_RS04700 () | 948444..949322 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |