MGE detailed information
MGE type: Prophage MGE length: 23045 bp
Accession: NZ_CP009644 Location: 1611430..1634474 Organism: Escherichia coli ER2796 strain K-12 ER2796 Replicon: chromosome
Accession: NZ_CP009644 Location: 1611430..1634474 Organism: Escherichia coli ER2796 strain K-12 ER2796 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ER2796_RS07965 () | 1607945..1608691 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| ER2796_RS07970 () | 1608780..1609466 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| ER2796_RS07975 () | 1609643..1609846 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| ER2796_RS07980 () | 1609881..1611341 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| ER2796_RS07985 () | 1611430..1612797 | - | 1368 | Protein_1517 | MHS family MFS transporter | - |
| ER2796_RS25300 () | 1613318..1613431 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| ER2796_RS07990 () | 1613500..1613733 | + | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| ER2796_RS07995 () | 1614050..1614640 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| ER2796_RS08000 () | 1614738..1615313 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| ER2796_RS08005 () | 1615313..1616275 | - | 963 | WP_001027733.1 | phage tail protein | - |
| ER2796_RS08010 () | 1616226..1616795 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| ER2796_RS08015 () | 1617184..1617417 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| ER2796_RS08020 () | 1617461..1618669 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| ER2796_RS08025 () | 1618813..1619223 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| ER2796_RS08030 () | 1619375..1619548 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| ER2796_RS08035 () | 1619720..1619875 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| ER2796_RS25310 () | 1619954..1620019 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| ER2796_RS23480 () | 1620022..1620210 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| ER2796_RS08040 () | 1620221..1620433 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| ER2796_RS08045 () | 1620796..1621293 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| ER2796_RS08050 () | 1621290..1621823 | - | 534 | WP_001092971.1 | lysozyme | - |
| ER2796_RS08055 () | 1621820..1622131 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| ER2796_RS08060 () | 1622136..1622351 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| ER2796_RS08065 () | 1623105..1623320 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| ER2796_RS08070 () | 1623621..1623833 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| ER2796_RS25315 () | 1623888..1623977 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| ER2796_RS08075 () | 1624255..1625007 | - | 753 | WP_001047135.1 | antitermination protein | - |
| ER2796_RS08080 () | 1625021..1626070 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| ER2796_RS08085 () | 1626072..1626350 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| ER2796_RS08090 () | 1626417..1626668 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| ER2796_RS08095 () | 1626885..1627040 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| ER2796_RS08100 () | 1627112..1627399 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| ER2796_RS08105 () | 1627399..1627638 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| ER2796_RS23485 () | 1627663..1627968 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| ER2796_RS08110 () | 1628171..1628503 | + | 333 | WP_001301033.1 | protein FlxA | - |
| ER2796_RS22760 () | 1628940..1629089 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| ER2796_RS08115 () | 1629124..1629402 | - | 279 | Protein_1549 | hypothetical protein | - |
| ER2796_RS08120 () | 1629386..1629616 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| ER2796_RS08125 () | 1629700..1630107 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| ER2796_RS08130 () | 1630274..1630429 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| ER2796_RS08135 () | 1630589..1630807 | + | 219 | WP_038432574.1 | hypothetical protein | - |
| ER2796_RS08145 () | 1631375..1631563 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| ER2796_RS08150 () | 1631560..1631751 | + | 192 | WP_038432577.1 | lysis protein YdfD | - |
| ER2796_RS23500 () | 1631844..1632611 | + | 768 | Protein_1556 | exonuclease | - |
| ER2796_RS08160 () | 1632608..1633303 | + | 696 | Protein_1557 | IS3 family transposase IS2 | Transposase |
| ER2796_RS25325 () | 1633317..1634474 | + | 1158 | Protein_1558 | Putative defective protein IntQ ; Integrase | Integrase |
| ER2796_RS24800 () | 1634494..1634604 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| ER2796_RS08170 () | 1634662..1635681 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| ER2796_RS08175 () | 1635693..1636907 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| ER2796_RS08180 () | 1637113..1637439 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| ER2796_RS08185 () | 1637574..1637915 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| ER2796_RS08190 () | 1637950..1638510 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| ER2796_RS08195 () | 1638513..1639223 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.002 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.003 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.002 |