MGE detailed information
MGE type: Genomic_island MGE length: 29269 bp
Accession: NZ_CP009539 Location: 2624307..2653575 Organism: Yersinia ruckeri strain YRB Replicon: chromosome
Accession: NZ_CP009539 Location: 2624307..2653575 Organism: Yersinia ruckeri strain YRB Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BD65_RS16170 () | 2623421..2624302 | + | 882 | WP_052470853.1 | hypothetical protein | - |
| BD65_RS11835 () | 2624307..2625503 | + | 1197 | WP_052470854.1 | DGQHR domain-containing protein | - |
| BD65_RS11840 () | 2625574..2625927 | - | 354 | WP_042527203.1 | DNA sulfur modification protein DndE | - |
| BD65_RS11845 () | 2625927..2627927 | - | 2001 | WP_042527205.1 | DNA sulfur modification protein DndD | - |
| BD65_RS11850 () | 2627917..2629551 | - | 1635 | WP_042527207.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| BD65_RS11855 () | 2629548..2630633 | - | 1086 | WP_042527209.1 | DNA sulfur modification protein DndB | - |
| BD65_RS11860 () | 2630833..2631426 | - | 594 | WP_042527211.1 | hypothetical protein | - |
| BD65_RS11865 () | 2631526..2631732 | - | 207 | WP_042527213.1 | helix-turn-helix domain-containing protein | - |
| BD65_RS11870 () | 2631832..2632410 | - | 579 | WP_042527215.1 | inovirus-type Gp2 protein | - |
| BD65_RS11875 () | 2632949..2633189 | + | 241 | Protein_2318 | hypothetical protein | - |
| BD65_RS17165 () | 2633169..2633516 | + | 348 | WP_201773459.1 | hypothetical protein | - |
| BD65_RS11885 () | 2633591..2634702 | + | 1112 | WP_144403006.1 | IS3 family transposase IS1400 | Transposase |
| BD65_RS11890 () | 2634714..2635328 | - | 615 | Protein_2321 | IS3 family transposase ISPin3 | Transposase |
| BD65_RS11895 () | 2635274..2635582 | - | 309 | WP_042527219.1 | IS3 family transposase ISBrsa1 | Transposase |
| BD65_RS11900 () | 2636006..2636722 | - | 717 | WP_042527221.1 | M48 family metallopeptidase | - |
| BD65_RS11905 () | 2636722..2639817 | - | 3096 | WP_042527223.1 | HsdR family type I site-specific deoxyribonuclease | - |
| BD65_RS11910 () | 2639838..2640905 | - | 1068 | WP_042527224.1 | macro domain-containing protein | Antitoxin Detail |
| BD65_RS11915 () | 2640902..2641558 | - | 657 | WP_042527226.1 | DUF4433 domain-containing protein | Toxin Detail |
| BD65_RS11920 () | 2641548..2642138 | - | 591 | WP_042527228.1 | DUF4433 domain-containing protein | - |
| BD65_RS11925 () | 2642143..2643540 | - | 1398 | WP_042527230.1 | restriction endonuclease subunit S | - |
| BD65_RS11930 () | 2643540..2645977 | - | 2438 | Protein_2329 | type I restriction-modification system subunit M | - |
| BD65_RS11935 () | 2646017..2646256 | - | 240 | WP_012543063.1 | hypothetical protein | - |
| BD65_RS11940 () | 2646608..2647882 | - | 1275 | WP_042527232.1 | hypothetical protein ; Integrase | Integrase |
| BD65_RS11945 () | 2648257..2649207 | - | 951 | WP_042527234.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| BD65_RS11950 () | 2649200..2649595 | - | 396 | WP_042527235.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| BD65_RS16600 () | 2649670..2649847 | - | 178 | Protein_2334 | DUF4942 domain-containing protein | - |
| BD65_RS11955 () | 2649883..2650968 | - | 1086 | Protein_2335 | IS3 family transposase | - |
| BD65_RS11965 () | 2651681..2652835 | + | 1155 | WP_042528374.1 | N-acetylneuraminate epimerase | - |
| BD65_RS11970 () | 2652883..2653575 | + | 693 | WP_042527236.1 | membrane protein | - |
| BD65_RS11975 () | 2654166..2656571 | + | 2406 | WP_158499447.1 | polysaccharide lyase 8 family protein | - |
| BD65_RS11980 () | 2657056..2657985 | + | 930 | WP_042527238.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|