MGE detailed information
MGE type: Prophage MGE length: 40172 bp
Accession: NZ_CP009423 Location: 1954657..1994828 Organism: Staphylococcus aureus strain USA300_SUR1 Replicon: chromosome
Accession: NZ_CP009423 Location: 1954657..1994828 Organism: Staphylococcus aureus strain USA300_SUR1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LG33_RS10055 () | 1950470..1951216 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| LG33_RS10060 () | 1951221..1951694 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| LG33_RS10065 () | 1951760..1952017 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| LG33_RS10070 () | 1952014..1953015 | - | 1002 | WP_000778523.1 | o-succinylbenzoate synthase | - |
| LG33_RS10075 () | 1953020..1954498 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| LG33_RS10080 () | 1954657..1955112 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| LG33_RS10085 () | 1955415..1956065 | + | 651 | WP_001795535.1 | excalibur calcium-binding domain-containing protein | - |
| LG33_RS10090 () | 1956146..1957141 | + | 996 | WP_076035562.1 | DUF4352 domain-containing protein | - |
| LG33_RS10095 () | 1957217..1957843 | + | 627 | Protein_1897 | hypothetical protein | - |
| LG33_RS10100 () | 1957884..1958228 | + | 345 | WP_000627551.1 | DUF3969 family protein | - |
| LG33_RS10105 () | 1958326..1958877 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| LG33_RS10110 () | 1959095..1959736 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| LG33_RS10115 () | 1959850..1960035 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| LG33_RS10120 () | 1960037..1960213 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| LG33_RS10125 () | 1960224..1960607 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| LG33_RS15675 () | 1961211..1961354 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| LG33_RS15775 () | 1961557..1961652 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1961680..1961739 | - | 60 | - | - | Antitoxin Detail |
| LG33_RS10140 () | 1961775..1961876 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| LG33_RS10145 () | 1961854..1962030 | - | 177 | Protein_1907 | transposase | - |
| LG33_RS10150 () | 1962224..1962601 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| LG33_RS10155 () | 1963122..1967234 | - | 4113 | WP_000831218.1 | ATP-binding protein | - |
| LG33_RS10160 () | 1968084..1969283 | - | 1200 | WP_000072576.1 | restriction endonuclease subunit S | - |
| LG33_RS10165 () | 1969276..1970832 | - | 1557 | WP_000028659.1 | type I restriction-modification system subunit M | - |
| LG33_RS10170 () | 1970996..1971130 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| LG33_RS10175 () | 1971195..1971914 | - | 720 | WP_076035563.1 | Serine protease SplF | VF |
| LG33_RS10180 () | 1972065..1972781 | - | 717 | WP_001038759.1 | Serine protease SplE | VF |
| LG33_RS15780 () | 1972883..1972990 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| LG33_RS10185 () | 1972939..1973658 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| LG33_RS10190 () | 1973779..1974498 | - | 720 | WP_001038867.1 | Serine protease SplC | VF |
| LG33_RS10195 () | 1974556..1975278 | - | 723 | WP_001039447.1 | Serine protease SplB | VF |
| LG33_RS10200 () | 1975403..1976110 | - | 708 | WP_001039435.1 | Serine protease SplA | VF |
| LG33_RS10210 () | 1977074..1977640 | + | 567 | Protein_1920 | DUF4888 domain-containing protein | - |
| LG33_RS10215 () | 1978114..1978812 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| LG33_RS10220 () | 1978809..1979570 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| LG33_RS10225 () | 1979567..1980259 | - | 693 | WP_001096791.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| LG33_RS10230 () | 1980282..1981655 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| LG33_RS10235 () | 1981665..1982183 | - | 519 | WP_000504439.1 | flavoprotein | - |
| LG33_RS10240 () | 1982199..1983443 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| LG33_RS10245 () | 1983436..1986429 | - | 2994 | WP_001092605.1 | lantibiotic dehydratase | - |
| LG33_RS10250 () | 1986494..1986637 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| LG33_RS10260 () | 1987374..1987517 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| LG33_RS10265 () | 1987759..1988742 | - | 984 | WP_076035564.1 | Leucotoxin LukDv | VF |
| LG33_RS10270 () | 1988744..1989679 | - | 936 | WP_031771766.1 | Leucotoxin LukEv | VF |
| LG33_RS10275 () | 1990478..1991017 | + | 540 | WP_000226886.1 | hypothetical protein | - |
| LG33_RS10280 () | 1991030..1991817 | + | 788 | Protein_1933 | DUF1828 domain-containing protein | - |
| LG33_RS15910 () | 1992278..1992486 | + | 209 | Protein_1934 | hypothetical protein | - |
| LG33_RS10330 () | 1994274..1994828 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| LG33_RS10340 () | 1995151..1996551 | - | 1401 | WP_000167538.1 | protoporphyrinogen oxidase | - |
| LG33_RS10345 () | 1996575..1997498 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| LG33_RS10350 () | 1997556..1998593 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| LG33_RS10355 () | 1998583..1998693 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| LG33_RS10360 () | 1998856..1999359 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA10024 | NC_009641 | 1882747..1922929 | 0 |