MGE detailed information
MGE type: Prophage MGE length: 51517 bp
Accession: NZ_CP009423 Location: 1873314..1924830 Organism: Staphylococcus aureus strain USA300_SUR1 Replicon: chromosome
Accession: NZ_CP009423 Location: 1873314..1924830 Organism: Staphylococcus aureus strain USA300_SUR1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LG33_RS09540 () | 1872987..1873178 | - | 192 | WP_050961202.1 | hypothetical protein | - |
| LG33_RS09545 () | 1873314..1874759 | - | 1446 | WP_050961201.1 | SH3 domain-containing protein | - |
| LG33_RS09550 () | 1874740..1875177 | - | 438 | WP_000354119.1 | phage holin | - |
| LG33_RS09555 () | 1875233..1875628 | - | 396 | WP_031890882.1 | hypothetical protein | - |
| LG33_RS09560 () | 1875634..1876872 | - | 1239 | WP_031890881.1 | BppU family phage baseplate upper protein | - |
| LG33_RS09565 () | 1876885..1878783 | - | 1899 | WP_050961200.1 | Bifunctional autolysin | VF |
| LG33_RS09570 () | 1878920..1879220 | - | 301 | Protein_1792 | DUF2951 domain-containing protein | - |
| LG33_RS09575 () | 1879260..1879433 | - | 174 | WP_000782200.1 | XkdX family protein | - |
| LG33_RS09580 () | 1879437..1879814 | - | 378 | WP_031844790.1 | DUF2977 domain-containing protein | - |
| LG33_RS09585 () | 1879814..1881637 | - | 1824 | WP_050961199.1 | phage baseplate upper protein | - |
| LG33_RS09590 () | 1881637..1883547 | - | 1911 | WP_050961198.1 | hypothetical protein | - |
| LG33_RS09595 () | 1883562..1885463 | - | 1902 | WP_000156414.1 | phage tail protein | - |
| LG33_RS09600 () | 1885472..1886419 | - | 948 | WP_031898192.1 | phage tail family protein | - |
| LG33_RS09605 () | 1886432..1889899 | - | 3468 | WP_050961197.1 | hypothetical protein | - |
| LG33_RS09610 () | 1889916..1890260 | - | 345 | WP_001599101.1 | hypothetical protein | - |
| LG33_RS09615 () | 1890290..1890655 | - | 366 | WP_031898197.1 | tail assembly chaperone | - |
| LG33_RS09620 () | 1890717..1891298 | - | 582 | WP_031898198.1 | phage major tail protein, TP901-1 family | - |
| LG33_RS09625 () | 1891317..1891700 | - | 384 | WP_000188640.1 | hypothetical protein | - |
| LG33_RS09630 () | 1891712..1892059 | - | 348 | WP_001017815.1 | HK97 gp10 family phage protein | - |
| LG33_RS09635 () | 1892059..1892361 | - | 303 | WP_031880723.1 | hypothetical protein | - |
| LG33_RS09640 () | 1892358..1892690 | - | 333 | WP_000208959.1 | phage head-tail connector protein | - |
| LG33_RS09645 () | 1892699..1892986 | - | 288 | WP_001114085.1 | hypothetical protein | - |
| LG33_RS09650 () | 1893008..1893982 | - | 975 | WP_000438500.1 | phage major capsid protein | - |
| LG33_RS09655 () | 1893996..1894616 | - | 621 | WP_031925652.1 | DUF4355 domain-containing protein | - |
| LG33_RS15895 () | 1894725..1894874 | - | 150 | WP_031898218.1 | hypothetical protein | - |
| LG33_RS09665 () | 1894947..1895942 | - | 996 | WP_001813737.1 | minor capsid protein | - |
| LG33_RS09670 () | 1895949..1897484 | - | 1536 | WP_000921887.1 | phage portal protein | - |
| LG33_RS09675 () | 1897495..1898772 | - | 1278 | WP_000169945.1 | PBSX family phage terminase large subunit | - |
| LG33_RS09680 () | 1898759..1899199 | - | 441 | WP_001003271.1 | terminase small subunit | - |
| LG33_RS09685 () | 1899386..1899805 | - | 420 | WP_000058632.1 | transcriptional regulator | - |
| LG33_RS09690 () | 1899820..1899966 | - | 147 | WP_000990005.1 | hypothetical protein | - |
| LG33_RS09695 () | 1899967..1900140 | - | 174 | WP_031924097.1 | transcriptional activator RinB | - |
| LG33_RS09700 () | 1900137..1900343 | - | 207 | WP_031764620.1 | DUF1381 domain-containing protein | - |
| LG33_RS09705 () | 1900380..1900886 | - | 507 | WP_076035554.1 | dUTPase | - |
| LG33_RS15900 () | 1900901..1901062 | - | 162 | WP_000889682.1 | hypothetical protein | - |
| LG33_RS09710 () | 1901063..1901344 | - | 282 | WP_000454994.1 | hypothetical protein | - |
| LG33_RS15905 () | 1901345..1901518 | - | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| LG33_RS09715 () | 1901508..1901759 | - | 252 | WP_076035555.1 | DUF1024 family protein | Toxin Detail |
| LG33_RS09720 () | 1901752..1902141 | - | 390 | WP_033861700.1 | hypothetical protein | - |
| LG33_RS09725 () | 1902138..1902485 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| LG33_RS09730 () | 1902485..1902676 | - | 192 | WP_076035556.1 | hypothetical protein | - |
| LG33_RS09735 () | 1902673..1903053 | - | 381 | WP_076035557.1 | hypothetical protein | - |
| LG33_RS09740 () | 1903067..1903315 | - | 249 | WP_076035558.1 | phi PVL orf 51-like protein | - |
| LG33_RS09745 () | 1903316..1903825 | - | 510 | WP_076035559.1 | hypothetical protein | - |
| LG33_RS09750 () | 1903826..1904011 | - | 186 | WP_072512743.1 | DUF3113 family protein | - |
| LG33_RS09755 () | 1904016..1904420 | - | 405 | WP_076035560.1 | DUF1064 domain-containing protein | - |
| LG33_RS09760 () | 1904431..1904652 | - | 222 | WP_001123685.1 | DUF3269 family protein | - |
| LG33_RS09765 () | 1904655..1904870 | - | 216 | WP_001024406.1 | hypothetical protein | - |
| LG33_RS09770 () | 1904867..1906108 | - | 1242 | WP_001106169.1 | AAA family ATPase | - |
| LG33_RS09775 () | 1906105..1906461 | - | 357 | WP_031764163.1 | hypothetical protein | - |
| LG33_RS09780 () | 1906461..1907246 | - | 786 | WP_076035561.1 | phage replisome organizer N-terminal domain-containing protein | - |
| LG33_RS09785 () | 1907218..1907913 | - | 696 | WP_031764159.1 | phi PV83 orf 19-like protein | - |
| LG33_RS09790 () | 1907927..1908355 | - | 429 | WP_031764158.1 | single-stranded DNA-binding protein | - |
| LG33_RS09795 () | 1908355..1908993 | - | 639 | WP_001043062.1 | ERF family protein | - |
| LG33_RS09800 () | 1908993..1909472 | - | 480 | WP_000002512.1 | siphovirus Gp157 family protein | - |
| LG33_RS09805 () | 1909465..1909701 | - | 237 | WP_000848127.1 | hypothetical protein | - |
| LG33_RS09810 () | 1909709..1909969 | - | 261 | WP_000291100.1 | hypothetical protein ; Integrase | Integrase |
| LG33_RS09815 () | 1910063..1910224 | - | 162 | WP_000048124.1 | DUF1270 family protein | - |
| LG33_RS09820 () | 1910217..1910438 | - | 222 | WP_000977381.1 | hypothetical protein | - |
| LG33_RS09825 () | 1910509..1911174 | + | 666 | WP_031764600.1 | hypothetical protein | - |
| LG33_RS09830 () | 1911279..1912028 | - | 750 | WP_001148587.1 | phage antirepressor KilAC domain-containing protein | - |
| LG33_RS09835 () | 1912030..1912215 | - | 186 | WP_000933365.1 | helix-turn-helix transcriptional regulator | - |
| LG33_RS09840 () | 1912789..1912992 | - | 204 | WP_031764597.1 | hypothetical protein | - |
| LG33_RS09845 () | 1913006..1913242 | - | 237 | WP_001121116.1 | helix-turn-helix domain-containing protein | - |
| LG33_RS09850 () | 1913394..1913708 | + | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LG33_RS09855 () | 1913721..1914182 | + | 462 | WP_031764593.1 | toxin | Toxin Detail |
| LG33_RS09860 () | 1914200..1914703 | + | 504 | WP_031764591.1 | hypothetical protein | - |
| LG33_RS09865 () | 1914765..1915814 | + | 1050 | WP_031764589.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| LG33_RS09870 () | 1915890..1916909 | - | 1020 | Protein_1854 | hypothetical protein | VF |
| LG33_RS09875 () | 1917235..1917546 | - | 312 | WP_000836465.1 | rhodanese-like domain-containing protein | - |
| LG33_RS09880 () | 1917568..1919985 | - | 2418 | WP_001549041.1 | leucine--tRNA ligase | - |
| LG33_RS09885 () | 1920273..1921454 | - | 1182 | WP_001025061.1 | MFS transporter | - |
| LG33_RS09890 () | 1921564..1922517 | + | 954 | WP_000526539.1 | TIGR01212 family radical SAM protein | - |
| LG33_RS09895 () | 1922514..1923077 | + | 564 | WP_000764419.1 | class I SAM-dependent methyltransferase | - |
| LG33_RS09900 () | 1923197..1923598 | - | 402 | WP_000757543.1 | MarR family transcriptional regulator | - |
| LG33_RS09905 () | 1924169..1924830 | - | 662 | Protein_1861 | IS1182 family transposase ISSau3 | Transposase |
| LG33_RS09910 () | 1925177..1926004 | - | 828 | WP_000266096.1 | alpha/beta hydrolase | - |
| LG33_RS09915 () | 1926007..1926126 | - | 120 | WP_001790712.1 | hypothetical protein | - |
| LG33_RS09925 () | 1926238..1927239 | + | 1002 | WP_001196354.1 | proline dehydrogenase | - |
| LG33_RS09930 () | 1927361..1927825 | - | 465 | WP_001008551.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| LG33_RS09935 () | 1927838..1929019 | - | 1182 | WP_001159022.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| LG33_RS09940 () | 1929030..1929662 | - | 633 | WP_000493892.1 | riboflavin synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|