MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 57990 bp
Accession: NZ_CP009114 Location: 2675897..2733886 Organism: Klebsiella pneumoniae strain carbapenem-resistant blaNDM-1 Replicon: chromosome
Accession: NZ_CP009114 Location: 2675897..2733886 Organism: Klebsiella pneumoniae strain carbapenem-resistant blaNDM-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FH42_RS13425 () | 2671163..2672416 | + | 1254 | WP_004151767.1 | nucleoside permease | - |
| FH42_RS13430 () | 2672460..2674598 | - | 2139 | WP_004151766.1 | ornithine decarboxylase | - |
| FH42_RS13435 () | 2675018..2675731 | + | 714 | WP_002916694.1 | DUF554 domain-containing protein | - |
| FH42_RS13445 () | 2676130..2677077 | - | 948 | WP_002916695.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| FH42_RS13450 () | 2677094..2678383 | - | 1290 | WP_004188585.1 | TraI domain-containing protein | - |
| FH42_RS13455 () | 2678518..2679498 | - | 981 | WP_004151764.1 | DUF1738 domain-containing protein | - |
| FH42_RS13460 () | 2679582..2680187 | - | 606 | WP_004151763.1 | DUF3085 domain-containing protein | - |
| FH42_RS13465 () | 2680290..2680637 | - | 348 | WP_004151762.1 | hypothetical protein | - |
| FH42_RS13470 () | 2680735..2681133 | - | 399 | WP_004151761.1 | antirestriction protein | - |
| FH42_RS13475 () | 2681216..2681494 | - | 279 | WP_004151760.1 | hypothetical protein | - |
| FH42_RS13480 () | 2681839..2682792 | + | 954 | WP_004151759.1 | hypothetical protein | - |
| FH42_RS13485 () | 2682797..2683690 | - | 894 | WP_004151758.1 | hypothetical protein ; Integrase | Integrase |
| FH42_RS31110 () | 2684704..2684844 | - | 141 | WP_004151757.1 | hypothetical protein | - |
| FH42_RS31115 () | 2684848..2685213 | - | 366 | WP_004151756.1 | hypothetical protein | - |
| FH42_RS13495 () | 2685284..2686264 | + | 981 | WP_000019473.1 | IS5 family transposase ISKpn26 | Transposase |
| FH42_RS13500 () | 2686541..2686996 | + | 456 | WP_004152613.1 | cold shock domain-containing protein | - |
| FH42_RS13505 () | 2687075..2687320 | - | 246 | WP_004155677.1 | helix-turn-helix domain-containing protein | - |
| FH42_RS13510 () | 2687424..2687675 | + | 252 | WP_004152612.1 | helix-turn-helix domain-containing protein | - |
| FH42_RS13515 () | 2687900..2688199 | + | 300 | WP_004152611.1 | hypothetical protein | - |
| FH42_RS13520 () | 2688243..2689772 | - | 1530 | WP_004152610.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| FH42_RS13525 () | 2689775..2690116 | - | 342 | WP_004152609.1 | hypothetical protein | - |
| FH42_RS13530 () | 2690113..2691534 | - | 1422 | WP_004153700.1 | integrating conjugative element protein | - |
| FH42_RS13535 () | 2691550..2692491 | - | 942 | WP_004152607.1 | TIGR03756 family integrating conjugative element protein | - |
| FH42_RS13540 () | 2692488..2692883 | - | 396 | WP_004152606.1 | TIGR03757 family integrating conjugative element protein | - |
| FH42_RS13545 () | 2693001..2694599 | - | 1599 | WP_004154311.1 | hypothetical protein | - |
| FH42_RS13550 () | 2694803..2695813 | - | 1011 | WP_004150870.1 | hypothetical protein | - |
| FH42_RS28465 () | 2696019..2696636 | - | 618 | WP_004199166.1 | SymE family type I addiction module toxin | - |
| FH42_RS31120 () | 2697736..2698017 | + | 282 | WP_016197749.1 | hypothetical protein | - |
| FH42_RS13565 () | 2698070..2699437 | + | 1368 | WP_004150873.1 | hypothetical protein | - |
| FH42_RS28470 () | 2699677..2700381 | + | 705 | WP_004150874.1 | restriction endonuclease | - |
| FH42_RS13585 () | 2700883..2703660 | - | 2778 | WP_004188577.1 | conjugative transfer ATPase | - |
| FH42_RS13590 () | 2703657..2704055 | - | 399 | WP_004150877.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| FH42_RS13595 () | 2704069..2705553 | - | 1485 | WP_004217763.1 | TIGR03752 family integrating conjugative element protein | - |
| FH42_RS13600 () | 2705550..2706395 | - | 846 | WP_004150879.1 | TIGR03749 family integrating conjugative element protein | - |
| FH42_RS13605 () | 2706395..2707048 | - | 654 | WP_004150880.1 | TIGR03746 family integrating conjugative element protein | - |
| FH42_RS13610 () | 2707045..2707416 | - | 372 | WP_004150881.1 | TIGR03750 family conjugal transfer protein | - |
| FH42_RS13615 () | 2707426..2707779 | - | 354 | WP_004150882.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| FH42_RS13620 () | 2707794..2708030 | - | 237 | WP_004150883.1 | TIGR03758 family integrating conjugative element protein | - |
| FH42_RS13625 () | 2708027..2708344 | - | 318 | WP_004150884.1 | hypothetical protein | - |
| FH42_RS13630 () | 2708793..2709467 | + | 675 | WP_004217767.1 | hypothetical protein | - |
| FH42_RS13635 () | 2709727..2710203 | - | 477 | WP_004150886.1 | hypothetical protein | - |
| FH42_RS13640 () | 2710305..2710997 | - | 693 | WP_072093156.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| FH42_RS13645 () | 2711063..2711326 | - | 264 | WP_004150888.1 | hypothetical protein | - |
| FH42_RS13650 () | 2711323..2713422 | - | 2100 | WP_004150889.1 | type IV conjugative transfer system coupling protein TraD | - |
| FH42_RS13655 () | 2713460..2713972 | - | 513 | WP_004153655.1 | integrating conjugative element protein | - |
| FH42_RS13660 () | 2713969..2714538 | - | 570 | WP_004150891.1 | hypothetical protein | VF |
| FH42_RS13665 () | 2714517..2715134 | - | 618 | WP_004153005.1 | TIGR03759 family integrating conjugative element protein | - |
| FH42_RS13670 () | 2715248..2715988 | - | 741 | WP_004150893.1 | hypothetical protein | - |
| FH42_RS13675 () | 2715988..2716557 | - | 570 | WP_004150894.1 | hypothetical protein | VF |
| FH42_RS13680 () | 2716681..2717133 | - | 453 | WP_004150895.1 | DUF3577 domain-containing protein | - |
| FH42_RS30400 () | 2717720..2717857 | - | 138 | WP_014343427.1 | hypothetical protein | - |
| FH42_RS13690 () | 2717850..2718572 | - | 723 | WP_004150896.1 | TIGR03761 family integrating conjugative element protein | - |
| FH42_RS13695 () | 2718966..2720051 | + | 1086 | WP_004150897.1 | hypothetical protein | - |
| FH42_RS13700 () | 2720216..2720917 | + | 702 | WP_004227625.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| FH42_RS29440 () | 2720993..2721748 | - | 756 | WP_022644655.1 | DUF2321 domain-containing protein | - |
| FH42_RS13710 () | 2722139..2723467 | - | 1329 | WP_004150900.1 | WG repeat-containing protein | - |
| FH42_RS31125 () | 2723649..2723918 | + | 270 | Protein_2656 | hypothetical protein | - |
| FH42_RS13720 () | 2724609..2725826 | - | 1218 | WP_004150902.1 | helix-turn-helix domain-containing protein | - |
| FH42_RS13725 () | 2725826..2726410 | - | 585 | WP_004150903.1 | DUF2857 domain-containing protein | - |
| FH42_RS13730 () | 2726410..2728032 | - | 1623 | WP_004150904.1 | transcriptional regulator | - |
| FH42_RS13735 () | 2728029..2729396 | - | 1368 | WP_004150905.1 | replicative DNA helicase | - |
| FH42_RS13740 () | 2729389..2729772 | - | 384 | WP_004150906.1 | hypothetical protein | - |
| FH42_RS13745 () | 2729772..2730644 | - | 873 | WP_004188557.1 | Tyrosine-protein kinase YwqD | VF |
| FH42_RS13750 () | 2731250..2731466 | - | 217 | Protein_2663 | IS3 family transposase ISYpe1 | Transposase |
| FH42_RS13755 () | 2731563..2732156 | - | 594 | WP_038430882.1 | hypothetical protein | - |
| FH42_RS13760 () | 2732860..2733345 | - | 486 | WP_004150910.1 | GNAT family N-acetyltransferase | Toxin Detail |
| FH42_RS13765 () | 2733342..2733635 | - | 294 | WP_004150912.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| FH42_RS13770 () | 2734280..2735656 | + | 1377 | WP_004217775.1 | cystathionine beta-synthase | - |
| FH42_RS13775 () | 2735667..2736815 | + | 1149 | WP_004150915.1 | PLP-dependent aspartate aminotransferase family protein | - |
| FH42_RS13780 () | 2736816..2737727 | - | 912 | WP_004188550.1 | LysR family transcriptional regulator | - |
| FH42_RS13785 () | 2737825..2738427 | + | 603 | WP_002916735.1 | short chain dehydrogenase | - |
| FH42_RS13790 () | 2738514..2738858 | + | 345 | WP_004174409.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Klebsiella pneumoniae subsp. pneumoniae HS11286 | Integrative and Conjugative Element | TA26030 | NC_016845 | 4502831..4561944 | 0.001 |