MGE detailed information
MGE type: IScluster/Tn MGE length: 6509 bp
Accession: NZ_CP009040 Location: 2305213..2311721 Organism: Xanthomonas citri pv. citri strain AW16 Replicon: chromosome
Accession: NZ_CP009040 Location: 2305213..2311721 Organism: Xanthomonas citri pv. citri strain AW16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD06_RS10405 () | 2300623..2302794 | + | 2172 | WP_015472108.1 | DotA/TraY family protein | - |
| AMD06_RS10410 () | 2302804..2303325 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD06_RS26065 () | 2304190..2305146 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD06_RS10420 () | 2305213..2306346 | - | 1134 | Protein_1971 | IS5 family transposase ISXo4 | Transposase |
| AMD06_RS10425 () | 2306386..2307473 | - | 1088 | Protein_1972 | IS3 family transposase ISXcd1 | Transposase |
| AMD06_RS10435 () | 2307686..2307865 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD06_RS10440 () | 2308136..2308450 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD06_RS10445 () | 2308453..2308743 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD06_RS10450 () | 2308731..2309009 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD06_RS10455 () | 2309179..2310447 | - | 1269 | Protein_1977 | Tn3 family transposase ISPsy42 | Transposase |
| AMD06_RS10465 () | 2310496..2311721 | + | 1226 | Protein_1978 | IS3 family transposase ISJsp1 | Transposase |
| AMD06_RS10470 () | 2312340..2313296 | + | 957 | WP_015472114.1 | recombinase family protein | - |
| AMD06_RS10475 () | 2313486..2315594 | + | 2109 | WP_015472116.1 | AAA family ATPase | - |
| AMD06_RS10480 () | 2315645..2315833 | + | 189 | WP_011051582.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | IScluster/Tn | TA20720 | NC_003919 | 2825080..2831588 | 0.001 |