MGE detailed information
MGE type: Genomic_island MGE length: 26530 bp
Accession: NZ_CP009034 Location: 2300672..2327201 Organism: Xanthomonas citri pv. citri strain AW14 Replicon: chromosome
Accession: NZ_CP009034 Location: 2300672..2327201 Organism: Xanthomonas citri pv. citri strain AW14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD08_RS10385 () | 2297594..2297770 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| AMD08_RS10390 () | 2297990..2298391 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| AMD08_RS10400 () | 2298680..2299771 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| AMD08_RS10410 () | 2300672..2302843 | + | 2172 | WP_015472108.1 | DotA/TraY family protein | - |
| AMD08_RS10415 () | 2302853..2303374 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD08_RS26090 () | 2304239..2305195 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD08_RS10425 () | 2305262..2306395 | - | 1134 | Protein_1970 | IS5 family transposase ISXo4 | Transposase |
| AMD08_RS10430 () | 2306435..2307522 | - | 1088 | Protein_1971 | IS3 family transposase ISXcd1 | Transposase |
| AMD08_RS10440 () | 2307735..2307914 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD08_RS10445 () | 2308185..2308499 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD08_RS10450 () | 2308502..2308792 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD08_RS10455 () | 2308780..2309058 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD08_RS10460 () | 2309228..2310496 | - | 1269 | Protein_1976 | Tn3 family transposase ISPsy42 | Transposase |
| AMD08_RS10470 () | 2310545..2311770 | + | 1226 | Protein_1977 | IS3 family transposase ISJsp1 | Transposase |
| AMD08_RS10475 () | 2312389..2313345 | + | 957 | WP_015472114.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AMD08_RS10480 () | 2313535..2315643 | + | 2109 | WP_015472116.1 | AAA family ATPase | - |
| AMD08_RS10485 () | 2315694..2315882 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| AMD08_RS10490 () | 2315879..2317465 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| AMD08_RS10495 () | 2317462..2318379 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| AMD08_RS10500 () | 2318388..2318717 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| AMD08_RS10505 () | 2318821..2319231 | + | 411 | WP_080936372.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD08_RS26095 () | 2319254..2319430 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| AMD08_RS24240 () | 2319623..2319823 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| AMD08_RS10515 () | 2320384..2320644 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| AMD08_RS10520 () | 2321043..2322044 | - | 1002 | WP_011051588.1 | replication protein | - |
| AMD08_RS10525 () | 2322277..2322510 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| AMD08_RS10530 () | 2323097..2324491 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| AMD08_RS10535 () | 2324488..2326605 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| AMD08_RS26100 () | 2327025..2327201 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| AMD08_RS10545 () | 2327484..2328590 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| AMD08_RS10550 () | 2328633..2329142 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| AMD08_RS10555 () | 2329154..2330812 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| AMD08_RS10560 () | 2331123..2331728 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.001 |