MGE detailed information
MGE type: Genomic_island MGE length: 26530 bp
Accession: NZ_CP009031 Location: 2300671..2327200 Organism: Xanthomonas citri pv. citri strain AW13 Replicon: chromosome
Accession: NZ_CP009031 Location: 2300671..2327200 Organism: Xanthomonas citri pv. citri strain AW13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD09_RS10380 () | 2297593..2297769 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| AMD09_RS10385 () | 2297989..2298390 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| AMD09_RS10395 () | 2298679..2299770 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| AMD09_RS10405 () | 2300671..2302842 | + | 2172 | WP_015472108.1 | DotA/TraY family protein | - |
| AMD09_RS10410 () | 2302852..2303373 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD09_RS26180 () | 2304238..2305194 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD09_RS10420 () | 2305261..2306394 | - | 1134 | Protein_1972 | IS5 family transposase ISXo4 | Transposase |
| AMD09_RS10425 () | 2306434..2307521 | - | 1088 | Protein_1973 | IS3 family transposase ISXcd1 | Transposase |
| AMD09_RS10435 () | 2307734..2307913 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD09_RS10440 () | 2308184..2308498 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD09_RS10445 () | 2308501..2308791 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD09_RS10450 () | 2308779..2309057 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD09_RS10455 () | 2309227..2310495 | - | 1269 | Protein_1978 | Tn3 family transposase ISPsy42 | Transposase |
| AMD09_RS10465 () | 2310544..2311769 | + | 1226 | Protein_1979 | IS3 family transposase ISJsp1 | Transposase |
| AMD09_RS10470 () | 2312388..2313344 | + | 957 | WP_015472114.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AMD09_RS10475 () | 2313534..2315642 | + | 2109 | WP_015472116.1 | AAA family ATPase | - |
| AMD09_RS10480 () | 2315693..2315881 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| AMD09_RS10485 () | 2315878..2317464 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| AMD09_RS10490 () | 2317461..2318378 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| AMD09_RS10495 () | 2318387..2318716 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| AMD09_RS10500 () | 2318820..2319230 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD09_RS26185 () | 2319253..2319429 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| AMD09_RS24235 () | 2319622..2319822 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| AMD09_RS10510 () | 2320383..2320643 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| AMD09_RS10515 () | 2321042..2322043 | - | 1002 | WP_011051588.1 | replication protein | - |
| AMD09_RS10520 () | 2322276..2322509 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| AMD09_RS10525 () | 2323096..2324490 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| AMD09_RS10530 () | 2324487..2326604 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| AMD09_RS26020 () | 2327024..2327200 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| AMD09_RS10540 () | 2327483..2328589 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| AMD09_RS10545 () | 2328632..2329141 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| AMD09_RS10550 () | 2329153..2330811 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| AMD09_RS10555 () | 2331122..2331727 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.001 |