MGE detailed information
MGE type: IScluster/Tn MGE length: 6509 bp
Accession: NZ_CP009010 Location: 2813908..2820416 Organism: Xanthomonas citri pv. citri strain JX5 Replicon: chromosome
Accession: NZ_CP009010 Location: 2813908..2820416 Organism: Xanthomonas citri pv. citri strain JX5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
AMD20_RS12750 () | 2809318..2811489 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
AMD20_RS12755 () | 2811499..2812020 | + | 522 | WP_011051570.1 | hypothetical protein | - |
AMD20_RS24915 () | 2812459..2812599 | - | 141 | WP_157860651.1 | hypothetical protein | - |
AMD20_RS25080 () | 2812885..2813841 | - | 957 | WP_011051571.1 | hypothetical protein | - |
AMD20_RS12765 () | 2813908..2815041 | - | 1134 | Protein_2399 | IS5 family transposase ISXo4 | Transposase |
AMD20_RS12770 () | 2815081..2816168 | - | 1088 | Protein_2400 | IS3 family transposase ISXcd1 | Transposase |
AMD20_RS12780 () | 2816381..2816560 | - | 180 | WP_015463309.1 | hypothetical protein | - |
AMD20_RS12785 () | 2816831..2817145 | - | 315 | WP_015463310.1 | hypothetical protein | - |
AMD20_RS12790 () | 2817148..2817438 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
AMD20_RS12795 () | 2817426..2817704 | - | 279 | WP_040259533.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
AMD20_RS12800 () | 2817874..2819142 | - | 1269 | Protein_2405 | Tn3 family transposase ISPsy42 | Transposase |
AMD20_RS12810 () | 2819191..2820416 | + | 1226 | Protein_2406 | IS3 family transposase ISJsp1 | Transposase |
AMD20_RS12815 () | 2821035..2821991 | + | 957 | WP_015463313.1 | recombinase family protein | - |
AMD20_RS12820 () | 2822181..2824289 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
AMD20_RS12825 () | 2824340..2824528 | + | 189 | WP_011051582.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Xanthomonas axonopodis pv. citri str. 306 | IScluster/Tn | TA20720 | NC_003919 | 2825080..2831588 | 0 |