MGE detailed information
MGE type: Genomic_island MGE length: 26521 bp
Accession: NZ_CP009007 Location: 2820483..2847003 Organism: Xanthomonas citri pv. citri strain MF20 Replicon: chromosome
Accession: NZ_CP009007 Location: 2820483..2847003 Organism: Xanthomonas citri pv. citri strain MF20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD10_RS12735 () | 2817405..2817581 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| AMD10_RS12740 () | 2817801..2818202 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| AMD10_RS12750 () | 2818491..2819582 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| AMD10_RS12760 () | 2820483..2822654 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| AMD10_RS12765 () | 2822664..2823185 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD10_RS25260 () | 2824050..2825006 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD10_RS12775 () | 2825073..2826206 | - | 1134 | Protein_2412 | IS5 family transposase ISXo4 | Transposase |
| AMD10_RS12780 () | 2826246..2827333 | - | 1088 | Protein_2413 | IS3 family transposase ISXcd1 | Transposase |
| AMD10_RS12790 () | 2827546..2827725 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD10_RS12795 () | 2827996..2828310 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD10_RS12800 () | 2828313..2828603 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD10_RS12805 () | 2828591..2828869 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD10_RS12810 () | 2829039..2830307 | - | 1269 | Protein_2418 | Tn3 family transposase ISPsy42 | Transposase |
| AMD10_RS12820 () | 2830356..2831581 | + | 1226 | Protein_2419 | IS3 family transposase ISJsp1 | Transposase |
| AMD10_RS12825 () | 2832199..2833155 | + | 957 | WP_197707729.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AMD10_RS12830 () | 2833345..2835453 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| AMD10_RS12835 () | 2835504..2835692 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| AMD10_RS12840 () | 2835689..2837275 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| AMD10_RS12845 () | 2837272..2838189 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| AMD10_RS12850 () | 2838198..2838527 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| AMD10_RS12855 () | 2838631..2839041 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD10_RS25265 () | 2839064..2839240 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| AMD10_RS25270 () | 2839303..2839488 | - | 186 | WP_015463319.1 | hypothetical protein | - |
| AMD10_RS23620 () | 2839433..2839633 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| AMD10_RS12865 () | 2840194..2840454 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| AMD10_RS12870 () | 2840853..2841854 | - | 1002 | WP_011051588.1 | replication protein | - |
| AMD10_RS12875 () | 2842087..2842320 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| AMD10_RS12880 () | 2842899..2844293 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| AMD10_RS12885 () | 2844290..2846407 | + | 2118 | WP_011051591.1 | ATP-binding protein | - |
| AMD10_RS25275 () | 2846827..2847003 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| AMD10_RS12895 () | 2847286..2848392 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| AMD10_RS12900 () | 2848435..2848944 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| AMD10_RS12905 () | 2848956..2850614 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| AMD10_RS12910 () | 2850925..2851530 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |