MGE detailed information
MGE type: Genomic_island MGE length: 26522 bp
Accession: NZ_CP008998 Location: 2809322..2835843 Organism: Xanthomonas citri pv. citri strain MN12 Replicon: chromosome
Accession: NZ_CP008998 Location: 2809322..2835843 Organism: Xanthomonas citri pv. citri strain MN12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD14_RS12725 () | 2806244..2806420 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| AMD14_RS12730 () | 2806640..2807041 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| AMD14_RS12740 () | 2807330..2808421 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| AMD14_RS12750 () | 2809322..2811493 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| AMD14_RS12755 () | 2811503..2812024 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD14_RS25050 () | 2812889..2813845 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD14_RS12765 () | 2813912..2815045 | - | 1134 | Protein_2400 | IS5 family transposase ISXo4 | Transposase |
| AMD14_RS12770 () | 2815085..2816172 | - | 1088 | Protein_2401 | IS3 family transposase ISXcd1 | Transposase |
| AMD14_RS12780 () | 2816385..2816564 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD14_RS12785 () | 2816835..2817149 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD14_RS12790 () | 2817152..2817442 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD14_RS12795 () | 2817430..2817708 | - | 279 | WP_040259533.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD14_RS12800 () | 2817878..2819146 | - | 1269 | Protein_2406 | Tn3 family transposase ISPsy42 | Transposase |
| AMD14_RS12810 () | 2819195..2820420 | + | 1226 | Protein_2407 | IS3 family transposase ISJsp1 | Transposase |
| AMD14_RS12815 () | 2821039..2821995 | + | 957 | WP_015463313.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AMD14_RS12820 () | 2822185..2824293 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| AMD14_RS12825 () | 2824344..2824532 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| AMD14_RS12830 () | 2824529..2826115 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| AMD14_RS12835 () | 2826112..2827029 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| AMD14_RS12840 () | 2827038..2827367 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| AMD14_RS12845 () | 2827471..2827881 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD14_RS25055 () | 2827904..2828080 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| AMD14_RS23465 () | 2828273..2828473 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| AMD14_RS12855 () | 2829034..2829294 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| AMD14_RS12860 () | 2829693..2830694 | - | 1002 | WP_011051588.1 | replication protein | - |
| AMD14_RS12865 () | 2830927..2831160 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| AMD14_RS12870 () | 2831739..2833133 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| AMD14_RS12875 () | 2833130..2835247 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| AMD14_RS25060 () | 2835667..2835843 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| AMD14_RS12885 () | 2836126..2837232 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| AMD14_RS12890 () | 2837275..2837784 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| AMD14_RS12895 () | 2837796..2839454 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| AMD14_RS12900 () | 2839765..2840370 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |