MGE detailed information
MGE type: Genomic_island MGE length: 26523 bp
Accession: NZ_CP008992 Location: 2809736..2836258 Organism: Xanthomonas citri subsp. citri UI6 Replicon: chromosome
Accession: NZ_CP008992 Location: 2809736..2836258 Organism: Xanthomonas citri subsp. citri UI6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD19_RS12735 () | 2806658..2806834 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| AMD19_RS12740 () | 2807054..2807455 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| AMD19_RS12750 () | 2807744..2808835 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| AMD19_RS12760 () | 2809736..2811907 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| AMD19_RS12765 () | 2811917..2812438 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD19_RS25360 () | 2813303..2814259 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD19_RS12775 () | 2814326..2815459 | - | 1134 | Protein_2394 | IS5 family transposase ISXo4 | Transposase |
| AMD19_RS12780 () | 2815499..2816586 | - | 1088 | Protein_2395 | IS3 family transposase ISXcd1 | Transposase |
| AMD19_RS12790 () | 2816799..2816978 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD19_RS12795 () | 2817249..2817563 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD19_RS12800 () | 2817566..2817856 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD19_RS12805 () | 2817844..2818122 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD19_RS12810 () | 2818292..2819560 | - | 1269 | Protein_2400 | Tn3 family transposase ISPsy42 | Transposase |
| AMD19_RS12820 () | 2819609..2820834 | + | 1226 | Protein_2401 | IS3 family transposase ISJsp1 | Transposase |
| AMD19_RS12825 () | 2821454..2822410 | + | 957 | WP_015463313.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AMD19_RS12830 () | 2822600..2824708 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| AMD19_RS12835 () | 2824759..2824947 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| AMD19_RS12840 () | 2824944..2826530 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| AMD19_RS12845 () | 2826527..2827444 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| AMD19_RS12850 () | 2827453..2827782 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| AMD19_RS12855 () | 2827886..2828296 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD19_RS25365 () | 2828319..2828495 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| AMD19_RS23485 () | 2828688..2828888 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| AMD19_RS12865 () | 2829449..2829709 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| AMD19_RS12870 () | 2830108..2831109 | - | 1002 | WP_011051588.1 | replication protein | - |
| AMD19_RS12875 () | 2831342..2831575 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| AMD19_RS12880 () | 2832154..2833548 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| AMD19_RS12885 () | 2833545..2835662 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| AMD19_RS25370 () | 2836082..2836258 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| AMD19_RS12895 () | 2836541..2837647 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| AMD19_RS12900 () | 2837690..2838199 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| AMD19_RS12905 () | 2838211..2839869 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| AMD19_RS12910 () | 2840180..2840785 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |