MGE detailed information
MGE type: Genomic_island MGE length: 26523 bp
Accession: NZ_CP008989 Location: 2809733..2836255 Organism: Xanthomonas citri pv. citri strain UI7 Replicon: chromosome
Accession: NZ_CP008989 Location: 2809733..2836255 Organism: Xanthomonas citri pv. citri strain UI7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD18_RS12720 () | 2806655..2806831 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| AMD18_RS12725 () | 2807051..2807452 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| AMD18_RS12735 () | 2807741..2808832 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| AMD18_RS12745 () | 2809733..2811904 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| AMD18_RS12750 () | 2811914..2812435 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AMD18_RS25050 () | 2813300..2814256 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| AMD18_RS12760 () | 2814323..2815456 | - | 1134 | Protein_2402 | IS5 family transposase ISXo4 | Transposase |
| AMD18_RS12765 () | 2815496..2816583 | - | 1088 | Protein_2403 | IS3 family transposase ISXcd1 | Transposase |
| AMD18_RS12775 () | 2816796..2816975 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AMD18_RS12780 () | 2817246..2817560 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| AMD18_RS12785 () | 2817563..2817853 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AMD18_RS12790 () | 2817841..2818119 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AMD18_RS12795 () | 2818289..2819557 | - | 1269 | Protein_2408 | Tn3 family transposase ISPsy42 | Transposase |
| AMD18_RS12805 () | 2819606..2820831 | + | 1226 | Protein_2409 | IS3 family transposase ISJsp1 | Transposase |
| AMD18_RS12810 () | 2821451..2822407 | + | 957 | WP_015463313.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AMD18_RS12815 () | 2822597..2824705 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| AMD18_RS12820 () | 2824756..2824944 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| AMD18_RS12825 () | 2824941..2826527 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| AMD18_RS12830 () | 2826524..2827441 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| AMD18_RS12835 () | 2827450..2827779 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| AMD18_RS12840 () | 2827883..2828293 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD18_RS25055 () | 2828316..2828492 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| AMD18_RS25060 () | 2828555..2828740 | - | 186 | WP_015463319.1 | hypothetical protein | - |
| AMD18_RS23475 () | 2828685..2828885 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| AMD18_RS12850 () | 2829446..2829706 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| AMD18_RS12855 () | 2830105..2831106 | - | 1002 | WP_011051588.1 | replication protein | - |
| AMD18_RS12860 () | 2831339..2831572 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| AMD18_RS12865 () | 2832151..2833545 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| AMD18_RS12870 () | 2833542..2835659 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| AMD18_RS25065 () | 2836079..2836255 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| AMD18_RS12880 () | 2836538..2837644 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| AMD18_RS12885 () | 2837687..2838196 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| AMD18_RS12890 () | 2838208..2839866 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| AMD18_RS12895 () | 2840177..2840782 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |