MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92076 bp
Accession: NZ_CP008958 Location: 1..92076 Organism: Escherichia coli O157:H7 str. EDL933 Replicon: plasmid unnamed
Accession: NZ_CP008958 Location: 1..92076 Organism: Escherichia coli O157:H7 str. EDL933 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EDL933_RS28555 () | 1..561 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| EDL933_RS28560 () | 694..906 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| EDL933_RS28565 () | 1151..1612 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| EDL933_RS28570 () | 1658..1867 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| EDL933_RS28575 () | 1905..2243 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| EDL933_RS28580 () | 2483..2737 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| EDL933_RS28585 () | 2973..3047 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| EDL933_RS28590 () | 3040..3897 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| EDL933_RS28595 () | 4810..5094 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EDL933_RS28600 () | 5094..5369 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EDL933_RS28605 () | 5464..5670 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| EDL933_RS29325 () | 5770..5985 | - | 216 | Protein_11 | transposase | - |
| EDL933_RS31850 () | 6029..6595 | - | 567 | Protein_12 | IS3 family transposase ISSd1 | Transposase |
| EDL933_RS28620 () | 6595..7011 | - | 417 | Protein_13 | IS91 family transposase | - |
| EDL933_RS28625 () | 7011..7196 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| EDL933_RS28630 () | 7373..9583 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| EDL933_RS28635 () | 9627..10016 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| EDL933_RS28640 () | 10073..11061 | + | 989 | Protein_17 | IS3 family transposase IS629 | Transposase |
| EDL933_RS28645 () | 11242..15144 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| EDL933_RS32940 () | 15400..15881 | - | 482 | Protein_19 | IS1 family transposase IS1N | Transposase |
| EDL933_RS28665 () | 17323..18144 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| EDL933_RS28670 () | 18144..19250 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| EDL933_RS28675 () | 19340..21061 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| EDL933_RS28680 () | 21135..22133 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| EDL933_RS33935 () | 22186..22374 | + | 189 | Protein_24 | hypothetical protein | - |
| EDL933_RS34065 () | 22478..22564 | - | 87 | Protein_25 | IS3 family transposase ISEhe3 | Transposase |
| EDL933_RS28695 () | 23015..25711 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| EDL933_RS28700 () | 25798..26673 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| EDL933_RS28705 () | 26674..28641 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| EDL933_RS28710 () | 28641..30146 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| EDL933_RS28715 () | 30148..31371 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| EDL933_RS28720 () | 31402..31836 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| EDL933_RS28725 () | 31833..32387 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| EDL933_RS28730 () | 32402..32749 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| EDL933_RS28735 () | 32746..33345 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| EDL933_RS28740 () | 33342..34319 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| EDL933_RS28745 () | 34358..35530 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| EDL933_RS28750 () | 35517..36029 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| EDL933_RS28755 () | 36087..36920 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| EDL933_RS28760 () | 37012..37413 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| EDL933_RS28770 () | 37592..38763 | + | 1172 | Protein_40 | IS3 family transposase ISLad1 | Transposase |
| EDL933_RS28775 () | 39304..39819 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| EDL933_RS28780 () | 39821..42817 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| EDL933_RS28785 () | 42867..44987 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| EDL933_RS28790 () | 44991..46430 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| EDL933_RS34240 () | 46551..47043 | + | 493 | Protein_45 | Transcriptional repressor MprA | VF |
| EDL933_RS32955 () | 47174..47404 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| EDL933_RS28810 () | 47525..48265 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| EDL933_RS28815 () | 48550..49527 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| EDL933_RS28825 () | 49935..50135 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| EDL933_RS28830 () | 50132..50752 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| EDL933_RS28835 () | 50749..51432 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| EDL933_RS28845 () | 51891..52109 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| EDL933_RS28850 () | 52111..52416 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| EDL933_RS28855 () | 52417..53223 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| EDL933_RS31890 () | 54485..54823 | + | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| EDL933_RS28870 () | 55411..56577 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| EDL933_RS28875 () | 56577..57548 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| EDL933_RS28880 () | 58848..60572 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| EDL933_RS28885 () | 60649..61551 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| EDL933_RS32960 () | 61555..61860 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| EDL933_RS28895 () | 61937..62620 | + | 684 | WP_000085945.1 | DNA methylase | - |
| EDL933_RS28900 () | 62621..62842 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| EDL933_RS28905 () | 62736..63290 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| EDL933_RS34245 () | 63336..64112 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| EDL933_RS28915 () | 64653..64955 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| EDL933_RS28920 () | 65002..65424 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| EDL933_RS28925 () | 65421..65612 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| EDL933_RS34250 () | 65582..66091 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| EDL933_RS28935 () | 66608..66838 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| EDL933_RS28940 () | 66890..68251 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| EDL933_RS28945 () | 68298..68861 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| EDL933_RS28950 () | 68947..69402 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| EDL933_RS34255 () | 69472..69678 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| EDL933_RS28960 () | 69704..70156 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| EDL933_RS28965 () | 70213..70446 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| EDL933_RS28970 () | 70512..72470 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| EDL933_RS28975 () | 72525..72959 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| EDL933_RS28980 () | 72956..73717 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 73686..73884 | + | 199 | NuclAT_0 | - | - |
| - () | 73686..73884 | + | 199 | NuclAT_0 | - | - |
| - () | 73686..73884 | + | 199 | NuclAT_0 | - | - |
| - () | 73686..73884 | + | 199 | NuclAT_0 | - | - |
| EDL933_RS28990 () | 73949..74107 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| EDL933_RS28995 () | 74241..76262 | + | 2022 | Protein_81 | hypothetical protein | Relaxase |
| EDL933_RS29000 () | 76330..76761 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| EDL933_RS33950 () | 77419..77768 | - | 350 | Protein_83 | IS3 family transposase IS3H | Transposase |
| EDL933_RS33955 () | 77862..78125 | + | 264 | Protein_84 | IS21 family transposase ISEc62 | Transposase |
| EDL933_RS33960 () | 78165..78285 | + | 121 | Protein_85 | IS21 family transposase ISEc62 | Transposase |
| EDL933_RS31940 () | 78282..78434 | + | 153 | Protein_86 | IS1 family transposase | - |
| EDL933_RS29015 () | 78541..88050 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| EDL933_RS29020 () | 88124..88348 | + | 225 | Protein_88 | IS3 family transposase IS3H | Transposase |
| EDL933_RS33965 () | 88416..88586 | - | 171 | Protein_89 | IS3 family transposase IS1203 | Transposase |
| EDL933_RS33970 () | 88593..88844 | - | 252 | Protein_90 | IS3 family transposase IS1203 | Transposase |
| EDL933_RS29030 () | 88901..90289 | + | 1389 | Protein_91 | Multifunctional conjugation protein TraI | Relaxase |
| EDL933_RS29035 () | 90309..91055 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| EDL933_RS29040 () | 91114..91974 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|