MGE detailed information
MGE type: Genomic_island MGE length: 43393 bp
Accession: NZ_CP008885 Location: 1153427..1196819 Organism: Bifidobacterium longum strain BXY01 Replicon: chromosome
Accession: NZ_CP008885 Location: 1153427..1196819 Organism: Bifidobacterium longum strain BXY01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GS08_RS04800 () | 1149446..1150408 | + | 963 | WP_013140696.1 | aspartate carbamoyltransferase | - |
| GS08_RS04805 () | 1150408..1150827 | + | 420 | WP_013140697.1 | aspartate carbamoyltransferase regulatory subunit | - |
| GS08_RS04810 () | 1150824..1152320 | + | 1497 | WP_013140698.1 | amidohydrolase family protein | - |
| GS08_RS04815 () | 1152338..1153291 | + | 954 | WP_013140699.1 | orotidine-5'-phosphate decarboxylase | - |
| GS08_RS04820 () | 1153427..1154251 | + | 825 | WP_013140700.1 | dihydroorotate dehydrogenase electron transfer subunit | - |
| GS08_RS04825 () | 1154254..1155225 | + | 972 | WP_013140701.1 | dihydroorotate dehydrogenase | - |
| GS08_RS04830 () | 1155234..1155929 | + | 696 | WP_013140702.1 | orotate phosphoribosyltransferase | - |
| GS08_RS04835 () | 1156037..1156225 | + | 189 | WP_013140703.1 | hypothetical protein | - |
| GS08_RS04840 () | 1156551..1157672 | + | 1122 | WP_013140704.1 | DUF2974 domain-containing protein | - |
| GS08_RS04845 () | 1157827..1158750 | - | 924 | WP_013140705.1 | Hca operon transcriptional activator HcaR | VF |
| GS08_RS04850 () | 1158791..1159420 | - | 630 | WP_013140706.1 | HAD family phosphatase | - |
| GS08_RS04855 () | 1159579..1161342 | - | 1764 | WP_013140707.1 | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | - |
| GS08_RS04860 () | 1161382..1162572 | - | 1191 | WP_013140708.1 | pyridoxal phosphate-dependent aminotransferase | - |
| GS08_RS04865 () | 1163408..1164244 | + | 837 | WP_148217389.1 | RNA helicase | - |
| GS08_RS04870 () | 1164253..1164594 | - | 342 | WP_007052237.1 | DUF488 domain-containing protein | - |
| GS08_RS04875 () | 1164706..1165017 | - | 312 | WP_008783472.1 | hypothetical protein | - |
| GS08_RS11405 () | 1165102..1165242 | - | 141 | WP_013140710.1 | hypothetical protein | - |
| GS08_RS04880 () | 1165217..1166004 | - | 788 | Protein_956 | virulence protein RhuM/Fic/DOC family protein | - |
| GS08_RS04885 () | 1165989..1166450 | - | 462 | WP_196228184.1 | hypothetical protein | - |
| GS08_RS04890 () | 1166377..1166778 | + | 402 | WP_012577757.1 | hypothetical protein | - |
| GS08_RS04895 () | 1166799..1167099 | + | 301 | Protein_959 | DUF1287 domain-containing protein | - |
| GS08_RS04900 () | 1167107..1168132 | - | 1026 | WP_013140714.1 | hypothetical protein | - |
| GS08_RS11640 () | 1168318..1168518 | + | 201 | WP_038425938.1 | hypothetical protein | - |
| GS08_RS11645 () | 1168591..1169019 | + | 429 | WP_013140715.1 | hypothetical protein | - |
| GS08_RS04915 () | 1169099..1169749 | + | 651 | WP_013140716.1 | signal peptidase I | - |
| GS08_RS10740 () | 1170245..1170583 | + | 339 | Protein_964 | hypothetical protein | - |
| GS08_RS04925 () | 1170743..1172320 | - | 1578 | WP_013140718.1 | amino acid permease | - |
| GS08_RS04930 () | 1172644..1173204 | - | 561 | WP_038425939.1 | MFS transporter | - |
| GS08_RS04935 () | 1173236..1173391 | - | 156 | WP_007056283.1 | hypothetical protein | - |
| GS08_RS04940 () | 1173399..1173620 | + | 222 | WP_007054237.1 | YidC/Oxa1 family membrane protein insertase | - |
| GS08_RS04945 () | 1173620..1174393 | + | 774 | WP_080515166.1 | YidC/Oxa1 family membrane protein insertase | - |
| GS08_RS04950 () | 1174397..1175017 | + | 621 | WP_007054239.1 | NUDIX hydrolase | - |
| GS08_RS04955 () | 1175085..1175369 | + | 285 | WP_013140721.1 | amidohydrolase | - |
| GS08_RS04960 () | 1175533..1175994 | - | 462 | WP_013140722.1 | HipA N-terminal domain-containing protein | - |
| GS08_RS04965 () | 1176018..1176311 | - | 294 | WP_012471870.1 | hypothetical protein | - |
| GS08_RS04970 () | 1176404..1177045 | - | 642 | WP_013140723.1 | hypothetical protein | - |
| GS08_RS04975 () | 1177259..1177438 | + | 180 | WP_007056286.1 | antitoxin VbhA family protein | - |
| GS08_RS10745 () | 1177435..1177758 | + | 324 | Protein_976 | Fic family protein | - |
| GS08_RS04985 () | 1178296..1178952 | + | 657 | WP_013140724.1 | ATP-binding cassette domain-containing protein | - |
| GS08_RS04990 () | 1178955..1179683 | + | 729 | WP_013140725.1 | hypothetical protein | - |
| GS08_RS04995 () | 1179680..1180303 | + | 624 | WP_016462919.1 | hypothetical protein | - |
| GS08_RS05000 () | 1180507..1181382 | + | 876 | WP_013140727.1 | EamA family transporter | - |
| GS08_RS05005 () | 1181506..1181868 | + | 363 | WP_013140728.1 | hypothetical protein | - |
| GS08_RS05015 () | 1182860..1183153 | - | 294 | WP_003831807.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| GS08_RS05020 () | 1183157..1183426 | - | 270 | WP_038425943.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| GS08_RS05025 () | 1183611..1184780 | - | 1170 | WP_013140730.1 | ABC transporter permease | - |
| GS08_RS05030 () | 1184777..1185457 | - | 681 | WP_013140731.1 | putative ABC transporter ATP-binding protein YknY | VF |
| GS08_RS05035 () | 1185454..1186344 | - | 891 | WP_013140732.1 | hypothetical protein | - |
| GS08_RS05040 () | 1186341..1186856 | - | 516 | WP_013140733.1 | hypothetical protein | - |
| GS08_RS05045 () | 1186982..1187677 | + | 696 | WP_003829410.1 | response regulator transcription factor | - |
| GS08_RS05050 () | 1187743..1188816 | + | 1074 | WP_038425944.1 | histidine kinase | - |
| GS08_RS11650 () | 1189217..1189519 | - | 303 | WP_013140736.1 | hypothetical protein | - |
| GS08_RS11655 () | 1190326..1190580 | + | 255 | WP_003829406.1 | hypothetical protein | - |
| GS08_RS05060 () | 1190743..1191548 | + | 806 | Protein_992 | Abi family protein | - |
| GS08_RS05065 () | 1191958..1192287 | + | 330 | WP_013140739.1 | hypothetical protein | - |
| GS08_RS05070 () | 1192423..1192956 | + | 534 | WP_003829402.1 | GNAT family N-acetyltransferase | - |
| GS08_RS05075 () | 1192997..1193179 | - | 183 | WP_013140740.1 | DUF2316 family protein | - |
| GS08_RS05080 () | 1193337..1193852 | - | 516 | WP_007057098.1 | GNAT family N-acetyltransferase | - |
| GS08_RS05085 () | 1194031..1194489 | + | 459 | WP_007054250.1 | ASCH domain-containing protein | - |
| GS08_RS11410 () | 1194551..1195152 | + | 602 | Protein_998 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| GS08_RS05100 () | 1195806..1196819 | + | 1014 | WP_013140744.1 | VanZ family protein | - |
| GS08_RS05105 () | 1196842..1197390 | - | 549 | WP_013140745.1 | MFS transporter | - |
| GS08_RS05110 () | 1197815..1199215 | - | 1401 | WP_013140747.1 | amino acid permease | - |
| GS08_RS05115 () | 1199339..1200190 | + | 852 | WP_013140746.1 | deoxyribonuclease IV | - |
| GS08_RS05120 () | 1200323..1201015 | - | 693 | WP_013140748.1 | SOS response-associated peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bifidobacterium longum subsp. longum JDM301 | Genomic island | TA6289 | NC_014169 | 1151969..1195361 | 0 |