MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 120628 bp
Accession: NZ_CP008866 Location: 4938483..5059110 Organism: Pseudomonas aeruginosa strain T38079 Replicon: chromosome
Accession: NZ_CP008866 Location: 4938483..5059110 Organism: Pseudomonas aeruginosa strain T38079 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW01_RS23375 () | 4933992..4934264 | + | 273 | WP_016851967.1 | cysteine-rich CWC family protein | - |
| HW01_RS23380 () | 4934264..4934956 | + | 693 | WP_016851968.1 | 16S rRNA pseudouridine(516) synthase | - |
| HW01_RS23385 () | 4935092..4936135 | + | 1044 | WP_003098363.1 | L,D-transpeptidase | - |
| HW01_RS23390 () | 4936215..4936952 | + | 738 | WP_003085453.1 | murein L,D-transpeptidase catalytic domain family protein | - |
| HW01_RS23395 () | 4937404..4938306 | + | 903 | WP_014603238.1 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | - |
| HW01_RS23405 () | 4938749..4940602 | + | 1854 | WP_023093099.1 | hypothetical protein ; Integrase | Integrase |
| HW01_RS23410 () | 4940638..4941081 | - | 444 | WP_013721909.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| HW01_RS23415 () | 4941163..4943565 | + | 2403 | WP_013721908.1 | cadmium-translocating P-type ATPase | - |
| HW01_RS23420 () | 4943562..4944641 | + | 1080 | WP_013721907.1 | Lipoprotein signal peptidase | VF |
| HW01_RS32380 () | 4944645..4944809 | + | 165 | Protein_4531 | Tn3 family transposase | - |
| HW01_RS23430 () | 4944823..4945449 | - | 627 | WP_031642508.1 | substrate-binding domain-containing protein | - |
| HW01_RS23435 () | 4945555..4945854 | + | 300 | WP_003282197.1 | helix-turn-helix domain-containing protein | - |
| HW01_RS23440 () | 4945934..4947730 | - | 1797 | Protein_4534 | TraI domain-containing protein | - |
| HW01_RS23445 () | 4947934..4948854 | - | 921 | WP_019373846.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| HW01_RS23450 () | 4948847..4949605 | - | 759 | WP_023093102.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| HW01_RS23455 () | 4949829..4950200 | + | 372 | WP_031642510.1 | DUF3742 family protein | - |
| HW01_RS23460 () | 4950208..4951731 | - | 1524 | WP_023093104.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HW01_RS23465 () | 4951747..4952100 | - | 354 | WP_003292115.1 | hypothetical protein | - |
| HW01_RS23470 () | 4952097..4953503 | - | 1407 | WP_023093105.1 | integrating conjugative element protein | - |
| HW01_RS23475 () | 4953514..4954458 | - | 945 | WP_023093106.1 | TIGR03756 family integrating conjugative element protein | - |
| HW01_RS23480 () | 4954455..4954904 | - | 450 | WP_023093107.1 | TIGR03757 family integrating conjugative element protein | - |
| HW01_RS23485 () | 4955072..4955566 | - | 495 | WP_023093108.1 | DNA repair protein RadC | - |
| HW01_RS23490 () | 4955762..4956505 | - | 744 | WP_023093109.1 | DsbA family protein | - |
| HW01_RS23495 () | 4956519..4959407 | - | 2889 | WP_023093110.1 | conjugative transfer ATPase | - |
| HW01_RS23500 () | 4959407..4959841 | - | 435 | WP_023093111.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HW01_RS23505 () | 4959822..4961254 | - | 1433 | Protein_4547 | TIGR03752 family integrating conjugative element protein | - |
| HW01_RS23510 () | 4961244..4962158 | - | 915 | WP_023093113.1 | TIGR03749 family integrating conjugative element protein | - |
| HW01_RS23515 () | 4962155..4962847 | - | 693 | WP_023093114.1 | TIGR03746 family integrating conjugative element protein | - |
| HW01_RS23520 () | 4962844..4963254 | - | 411 | WP_023093115.1 | TIGR03750 family conjugal transfer protein | - |
| HW01_RS23525 () | 4963267..4963635 | - | 369 | WP_023093116.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| HW01_RS23530 () | 4963658..4963897 | - | 240 | WP_023093117.1 | TIGR03758 family integrating conjugative element protein | - |
| HW01_RS23535 () | 4963894..4964259 | - | 366 | WP_023093118.1 | RAQPRD family integrative conjugative element protein | - |
| HW01_RS23540 () | 4964484..4964681 | + | 198 | WP_023093119.1 | helix-turn-helix domain-containing protein | - |
| HW01_RS23545 () | 4964829..4965887 | + | 1059 | WP_031637509.1 | DNA cytosine methyltransferase | - |
| HW01_RS23550 () | 4965909..4966367 | + | 459 | WP_023093121.1 | DNA mismatch endonuclease Vsr | - |
| HW01_RS23555 () | 4966389..4969520 | + | 3132 | WP_023093122.1 | DISARM system SNF2-like helicase DrmD | - |
| HW01_RS23560 () | 4969517..4970155 | + | 639 | WP_023093123.1 | restriction endonuclease | - |
| HW01_RS23565 () | 4970149..4974552 | + | 4404 | WP_023093124.1 | hypothetical protein | - |
| HW01_RS23570 () | 4974582..4976516 | + | 1935 | WP_170871399.1 | ATP-binding protein | - |
| HW01_RS23575 () | 4976528..4979658 | + | 3131 | Protein_4561 | DEAD/DEAH box helicase | - |
| HW01_RS23580 () | 4979655..4981280 | + | 1626 | WP_023093127.1 | hypothetical protein | - |
| HW01_RS23585 () | 4981277..4985275 | + | 3999 | WP_031642511.1 | DISARM system helicase DrmA | - |
| HW01_RS23590 () | 4985278..4987134 | + | 1857 | WP_023093129.1 | DUF1998 domain-containing protein | - |
| HW01_RS23595 () | 4987136..4987897 | + | 762 | WP_031637507.1 | DISARM system phospholipase D-like protein DrmC | - |
| HW01_RS23600 () | 4987916..4988156 | - | 241 | Protein_4566 | DUF4400 domain-containing protein | - |
| HW01_RS23605 () | 4988193..4988669 | - | 477 | WP_071536146.1 | Mov34/MPN/PAD-1 family protein | - |
| HW01_RS23610 () | 4988657..4990288 | - | 1632 | WP_023093132.1 | ThiF family adenylyltransferase | - |
| HW01_RS23615 () | 4990285..4991427 | - | 1143 | WP_023093133.1 | hypothetical protein | - |
| HW01_RS23620 () | 4991421..4992422 | - | 1002 | WP_023093134.1 | patatin-like phospholipase family protein | - |
| HW01_RS23625 () | 4992429..4992653 | - | 225 | WP_023093135.1 | DUF2188 domain-containing protein | - |
| HW01_RS23630 () | 4992941..4993330 | + | 390 | WP_025297728.1 | helix-turn-helix domain-containing protein | - |
| HW01_RS23635 () | 4993333..4994202 | + | 870 | WP_023093136.1 | ImmA/IrrE family metallo-endopeptidase | - |
| HW01_RS23640 () | 4994260..4995009 | - | 750 | WP_023093138.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HW01_RS23645 () | 4995006..4997162 | - | 2157 | WP_023093139.1 | type IV conjugative transfer system coupling protein TraD | - |
| HW01_RS23650 () | 4997171..4997704 | - | 534 | WP_023093140.1 | integrating conjugative element protein | - |
| HW01_RS23655 () | 4997701..4998321 | - | 621 | WP_023093141.1 | hypothetical protein | VF |
| HW01_RS23660 () | 4998306..4999025 | - | 720 | WP_023093142.1 | TIGR03759 family integrating conjugative element protein | - |
| HW01_RS23665 () | 4999035..4999682 | - | 648 | WP_023093143.1 | hypothetical protein | - |
| HW01_RS23670 () | 4999679..5000248 | - | 570 | WP_023093144.1 | hypothetical protein | VF |
| HW01_RS23675 () | 5000448..5002721 | - | 2274 | WP_023093145.1 | hypothetical protein | - |
| HW01_RS23680 () | 5002821..5003066 | - | 246 | WP_023093146.1 | hypothetical protein | - |
| HW01_RS23685 () | 5003228..5004337 | - | 1110 | WP_023093147.1 | SAM-dependent methyltransferase | - |
| HW01_RS23690 () | 5004403..5005053 | - | 651 | WP_023093148.1 | hypothetical protein | - |
| HW01_RS23695 () | 5005138..5005503 | - | 366 | WP_023093149.1 | hypothetical protein | - |
| HW01_RS23700 () | 5005593..5006204 | - | 612 | WP_003294141.1 | DUF3275 family protein | - |
| HW01_RS23705 () | 5006260..5006811 | - | 552 | WP_023093150.1 | DUF3577 domain-containing protein | - |
| HW01_RS23710 () | 5007155..5007520 | - | 366 | WP_023093151.1 | DUF3085 domain-containing protein | - |
| HW01_RS23715 () | 5007587..5008384 | - | 798 | WP_023093152.1 | hypothetical protein | - |
| HW01_RS23720 () | 5008676..5009392 | - | 717 | WP_023093153.1 | hypothetical protein | - |
| HW01_RS23725 () | 5009643..5010035 | - | 393 | WP_023093154.1 | hypothetical protein | - |
| HW01_RS23730 () | 5010060..5010311 | - | 252 | WP_023093155.1 | hypothetical protein | - |
| HW01_RS23735 () | 5010937..5011836 | + | 900 | WP_031637504.1 | hypothetical protein | - |
| HW01_RS23740 () | 5012382..5014397 | - | 2016 | WP_023093157.1 | DNA topoisomerase III | - |
| HW01_RS23745 () | 5014692..5015075 | - | 384 | WP_004362284.1 | single-stranded DNA-binding protein | - |
| HW01_RS23750 () | 5015072..5015620 | - | 549 | WP_023093158.1 | DUF3158 family protein | - |
| HW01_RS23755 () | 5015617..5016405 | - | 789 | WP_023093159.1 | TIGR03761 family integrating conjugative element protein | - |
| HW01_RS23760 () | 5016589..5017116 | - | 528 | WP_023093160.1 | RES family NAD+ phosphorylase | Toxin Detail |
| HW01_RS23765 () | 5017113..5017484 | - | 372 | WP_023093161.1 | hypothetical protein | Antitoxin Detail |
| HW01_RS23770 () | 5017605..5018798 | - | 1194 | WP_023093162.1 | hypothetical protein | - |
| HW01_RS23775 () | 5018802..5019362 | - | 561 | WP_023093163.1 | DUF2857 domain-containing protein | - |
| HW01_RS23780 () | 5019380..5021038 | - | 1659 | WP_023093164.1 | ParB family protein | - |
| HW01_RS23785 () | 5021031..5021267 | - | 237 | WP_012584779.1 | hypothetical protein | - |
| HW01_RS23790 () | 5021251..5022117 | - | 867 | WP_023093165.1 | Iron-sulfur cluster carrier protein | VF |
| HW01_RS23795 () | 5022158..5022376 | - | 219 | WP_016446183.1 | AlpA family transcriptional regulator | - |
| HW01_RS23800 () | 5022495..5023256 | - | 762 | WP_023093166.1 | hypothetical protein | - |
| HW01_RS23805 () | 5023787..5024698 | - | 912 | WP_016446185.1 | LysR family transcriptional regulator | - |
| HW01_RS32395 () | 5024930..5025361 | + | 432 | WP_170288398.1 | hypothetical protein | - |
| HW01_RS23815 () | 5025531..5026439 | + | 909 | WP_023093167.1 | LysR family transcriptional regulator | - |
| HW01_RS23820 () | 5026448..5027008 | - | 561 | Protein_4610 | HTH-type transcriptional regulator HdfR | VF |
| HW01_RS23825 () | 5027130..5027681 | + | 552 | WP_020306394.1 | transposase | - |
| HW01_RS23830 () | 5027615..5027992 | - | 378 | WP_023093169.1 | IS110 family transposase IS5708 | Transposase |
| HW01_RS23835 () | 5028277..5028558 | + | 282 | WP_031642515.1 | helix-turn-helix domain-containing protein | - |
| HW01_RS23840 () | 5028594..5029163 | + | 570 | WP_008906266.1 | Small heat shock protein IbpA | VF |
| HW01_RS23845 () | 5029257..5032106 | + | 2850 | WP_023093170.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | VF |
| HW01_RS23850 () | 5032124..5033554 | + | 1431 | WP_023093171.1 | cardiolipin synthase | - |
| HW01_RS23855 () | 5033582..5035465 | + | 1884 | WP_023093172.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| HW01_RS23860 () | 5035462..5035902 | + | 441 | WP_023093173.1 | thioredoxin TrxC | - |
| HW01_RS23865 () | 5036057..5038864 | + | 2808 | WP_031656219.1 | hypothetical protein | VF |
| HW01_RS23870 () | 5039048..5039548 | + | 501 | WP_023093176.1 | phosphate-starvation-inducible PsiE family protein | - |
| HW01_RS23875 () | 5039526..5040491 | + | 966 | WP_023093177.1 | M48 family metalloprotease | - |
| HW01_RS23880 () | 5040516..5041667 | + | 1152 | WP_023093178.1 | hypothetical protein | VF |
| HW01_RS23885 () | 5041864..5042259 | + | 396 | WP_006217728.1 | transposase | - |
| HW01_RS23890 () | 5042256..5042588 | + | 333 | WP_003121550.1 | IS66 family transposase ISPsy43 | Transposase |
| HW01_RS23895 () | 5042665..5044201 | + | 1537 | Protein_4625 | IS66 family transposase ISBcen19 | Transposase |
| HW01_RS23900 () | 5044224..5044643 | - | 420 | WP_010791743.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| HW01_RS23905 () | 5044699..5045799 | + | 1101 | WP_077446928.1 | cation transporter | - |
| HW01_RS23910 () | 5045962..5046870 | + | 909 | WP_003141085.1 | LysR family transcriptional regulator | - |
| HW01_RS23915 () | 5047179..5047526 | - | 348 | WP_003123043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HW01_RS23920 () | 5047536..5047787 | - | 252 | WP_003114155.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HW01_RS23925 () | 5048001..5048984 | - | 984 | WP_016852062.1 | IS91 family transposase ISCARN110 | Transposase |
| HW01_RS23930 () | 5048984..5050276 | - | 1293 | WP_003115206.1 | hypothetical protein | - |
| HW01_RS23935 () | 5050535..5051797 | - | 1263 | WP_023093179.1 | hypothetical protein | VF |
| HW01_RS23940 () | 5051799..5052149 | - | 351 | WP_003159569.1 | DUF2523 domain-containing protein | - |
| HW01_RS23945 () | 5052159..5052764 | - | 606 | WP_014603242.1 | hypothetical protein | - |
| HW01_RS23950 () | 5053420..5053638 | - | 219 | WP_003163345.1 | hypothetical protein | - |
| HW01_RS23955 () | 5053652..5053903 | - | 252 | WP_003124954.1 | hypothetical protein | - |
| HW01_RS23965 () | 5054024..5054458 | - | 435 | WP_003125073.1 | hypothetical protein | - |
| HW01_RS32670 () | 5054974..5055260 | - | 287 | Protein_4639 | DUF5447 family protein | - |
| HW01_RS32675 () | 5055505..5055633 | - | 129 | Protein_4640 | Arc family DNA-binding protein | - |
| HW01_RS23980 () | 5055630..5055845 | - | 216 | WP_016852068.1 | hypothetical protein | - |
| HW01_RS23985 () | 5055958..5056230 | + | 273 | WP_071534339.1 | DNA-binding protein | - |
| HW01_RS23990 () | 5056285..5056977 | + | 693 | WP_023082821.1 | hypothetical protein | - |
| HW01_RS32400 () | 5057297..5058811 | + | 1515 | WP_023082822.1 | hypothetical protein | - |
| HW01_RS23995 () | 5059247..5059549 | - | 303 | WP_017002461.1 | hypothetical protein | - |
| HW01_RS24000 () | 5059954..5060247 | - | 294 | WP_023082823.1 | DUF2845 domain-containing protein | - |
| HW01_RS24005 () | 5060587..5060844 | + | 258 | WP_003085431.1 | YjhX family toxin | - |
| HW01_RS24010 () | 5060904..5061410 | + | 507 | WP_003123051.1 | N-acetyltransferase | - |
| HW01_RS24015 () | 5061454..5061849 | - | 396 | WP_003098430.1 | lactoylglutathione lyase | - |
| HW01_RS24020 () | 5061894..5062190 | - | 297 | WP_003120798.1 | antibiotic biosynthesis monooxygenase | - |
| HW01_RS24025 () | 5062306..5063160 | + | 855 | WP_003123052.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|