MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 100064 bp
Accession: NZ_CP008801 Location: 2974230..3074293 Organism: Escherichia coli KLY Replicon: chromosome
Accession: NZ_CP008801 Location: 2974230..3074293 Organism: Escherichia coli KLY Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQ24_RS14720 () | 2969952..2971328 | + | 1377 | WP_000362702.1 | HilA family transcriptional regulator YgeH | - |
| HQ24_RS14725 () | 2971496..2971714 | + | 219 | WP_000184091.1 | hypothetical protein | - |
| HQ24_RS14730 () | 2971797..2972273 | + | 477 | WP_001336167.1 | lytic transglycosylase domain-containing protein | - |
| HQ24_RS14735 () | 2972318..2972950 | - | 633 | Protein_2808 | response regulator transcription factor | - |
| HQ24_RS26630 () | 2973172..2973603 | - | 432 | WP_000606430.1 | hypothetical protein | - |
| HQ24_RS25805 () | 2973606..2973827 | - | 222 | WP_001372633.1 | hypothetical protein | - |
| HQ24_RS24710 () | 2973820..2974218 | - | 399 | Protein_2811 | type III secretion apparatus protein OrgA/MxiK | - |
| HQ24_RS25810 () | 2975550..2975699 | + | 150 | Protein_2813 | IS66 family transposase IS679 | Transposase |
| HQ24_RS26310 () | 2975760..2976113 | + | 354 | Protein_2814 | IS3 family transposase | - |
| HQ24_RS14780 () | 2976653..2977345 | - | 693 | WP_000286435.1 | hypothetical protein | - |
| HQ24_RS26315 () | 2978098..2981004 | - | 2907 | WP_064753882.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| HQ24_RS14800 () | 2984043..2988158 | - | 4116 | WP_038430649.1 | Outer membrane protein IcsA autotransporter | VF |
| HQ24_RS14805 () | 2988879..2989826 | + | 948 | WP_001193612.1 | Outer membrane protease OmpP | VF |
| HQ24_RS14810 () | 2989931..2991418 | + | 1488 | WP_072145210.1 | alpha/beta hydrolase | - |
| HQ24_RS24730 () | 2991794..2992054 | + | 261 | Protein_2820 | hypothetical protein | - |
| HQ24_RS14815 () | 2992175..2992915 | + | 741 | WP_001066941.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HQ24_RS14820 () | 2993200..2994177 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| HQ24_RS14835 () | 2995017..2995658 | - | 642 | WP_000990665.1 | hypothetical protein | - |
| HQ24_RS14840 () | 2997773..2998063 | + | 291 | WP_000538310.1 | hypothetical protein | - |
| HQ24_RS14845 () | 2998053..2998952 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| HQ24_RS14850 () | 2999002..3001227 | - | 2226 | WP_000698737.1 | phage T7 exclusion protein | - |
| HQ24_RS14855 () | 3001229..3002317 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| HQ24_RS14860 () | 3002897..3003115 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HQ24_RS14865 () | 3003117..3003422 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HQ24_RS14870 () | 3003423..3004229 | + | 807 | WP_000016982.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HQ24_RS14875 () | 3005003..3005758 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HQ24_RS14880 () | 3006346..3007512 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| HQ24_RS14885 () | 3007512..3008483 | + | 972 | WP_038430652.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HQ24_RS26635 () | 3009436..3010337 | + | 902 | Protein_2834 | DUF1281 domain-containing protein | - |
| HQ24_RS25825 () | 3010341..3010646 | + | 306 | WP_010892536.1 | hypothetical protein | - |
| HQ24_RS14900 () | 3010723..3011406 | + | 684 | WP_000085939.1 | DNA methylase | - |
| HQ24_RS14905 () | 3011407..3011628 | + | 222 | WP_001104904.1 | hypothetical protein | - |
| HQ24_RS14910 () | 3011522..3012076 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| HQ24_RS26640 () | 3012122..3012898 | + | 777 | WP_001005032.1 | hypothetical protein | - |
| HQ24_RS14920 () | 3013435..3013737 | + | 303 | WP_072095193.1 | antirestriction protein | - |
| HQ24_RS14925 () | 3013784..3014206 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| HQ24_RS14930 () | 3014203..3014394 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| HQ24_RS14940 () | 3015200..3015739 | + | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| HQ24_RS14945 () | 3015796..3016029 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| HQ24_RS14950 () | 3016095..3018053 | + | 1959 | WP_000117173.1 | ParB/RepB/Spo0J family partition protein | - |
| HQ24_RS14955 () | 3018108..3018542 | + | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| HQ24_RS14960 () | 3018539..3019258 | + | 720 | WP_000116348.1 | plasmid SOS inhibition protein A | - |
| - () | 3019270..3019468 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| - () | 3019270..3019468 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| - () | 3019270..3019468 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| - () | 3019270..3019468 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| HQ24_RS14970 () | 3019533..3019691 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HQ24_RS26645 () | 3019929..3020288 | - | 360 | Protein_2849 | hypothetical protein | - |
| HQ24_RS26650 () | 3020358..3020564 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| HQ24_RS14985 () | 3020589..3020876 | + | 288 | WP_000107542.1 | hypothetical protein | - |
| HQ24_RS14990 () | 3020995..3021816 | + | 822 | WP_001234417.1 | DUF945 domain-containing protein | - |
| HQ24_RS14995 () | 3022112..3022702 | - | 591 | WP_170919186.1 | hypothetical protein | VF |
| HQ24_RS15000 () | 3023035..3023418 | + | 384 | WP_001151527.1 | relaxosome protein TraM | - |
| HQ24_RS15005 () | 3023605..3024294 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| HQ24_RS15010 () | 3024393..3024788 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| HQ24_RS15015 () | 3024821..3025186 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| HQ24_RS15020 () | 3025201..3025512 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HQ24_RS15025 () | 3025534..3026100 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| HQ24_RS15030 () | 3026111..3026815 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| HQ24_RS15035 () | 3026815..3028242 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| HQ24_RS15040 () | 3028232..3028822 | + | 591 | WP_000002792.1 | conjugal transfer protein TraP | - |
| HQ24_RS15045 () | 3028776..3029006 | + | 231 | WP_071587746.1 | conjugal transfer protein TrbD | - |
| HQ24_RS15050 () | 3029018..3029269 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| HQ24_RS15055 () | 3029266..3029781 | + | 516 | WP_010892541.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HQ24_RS24775 () | 3029916..3030137 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| HQ24_RS15065 () | 3030297..3032924 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| HQ24_RS15070 () | 3032921..3033307 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| HQ24_RS15075 () | 3033304..3033936 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| HQ24_RS15080 () | 3033933..3034925 | + | 993 | WP_000830185.1 | conjugal transfer pilus assembly protein TraU | - |
| HQ24_RS15085 () | 3034934..3035572 | + | 639 | WP_000777688.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HQ24_RS15090 () | 3035569..3037377 | + | 1809 | WP_000821835.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HQ24_RS15095 () | 3037404..3037661 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| HQ24_RS15100 () | 3037654..3038397 | + | 744 | WP_001030367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HQ24_RS15105 () | 3038413..3038760 | + | 348 | WP_001287913.1 | conjugal transfer protein TrbA | - |
| HQ24_RS15110 () | 3038762..3039076 | - | 315 | WP_000415566.1 | protein ArtA | - |
| HQ24_RS15115 () | 3039157..3039441 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HQ24_RS15120 () | 3039428..3039973 | + | 546 | WP_000059850.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HQ24_RS15125 () | 3039903..3040244 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| HQ24_RS15130 () | 3040198..3040611 | + | 414 | WP_001331260.1 | F-type conjugal transfer protein TrbF | - |
| HQ24_RS15135 () | 3040611..3041984 | + | 1374 | WP_021553026.1 | conjugal transfer protein TraH | - |
| HQ24_RS15140 () | 3041981..3044797 | + | 2817 | WP_001007055.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HQ24_RS24780 () | 3044830..3045351 | + | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| HQ24_RS15150 () | 3045376..3046107 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| HQ24_RS15155 () | 3046360..3048513 | + | 2154 | WP_000009350.1 | type IV conjugative transfer system coupling protein TraD | - |
| HQ24_RS15160 () | 3048522..3048920 | - | 399 | WP_000911324.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HQ24_RS15165 () | 3048920..3049147 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HQ24_RS15170 () | 3049229..3054499 | + | 5271 | WP_000987005.1 | conjugative transfer relaxase/helicase TraI | - |
| HQ24_RS15175 () | 3054519..3055265 | + | 747 | WP_000205776.1 | conjugal transfer pilus acetylase TraX | - |
| HQ24_RS15180 () | 3055320..3055712 | + | 393 | Protein_2890 | fertility inhibition protein FinO | - |
| HQ24_RS15190 () | 3055781..3056943 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| HQ24_RS24785 () | 3056974..3057141 | + | 168 | Protein_2892 | conjugal transfer protein | - |
| HQ24_RS15195 () | 3057276..3057464 | + | 189 | WP_001345829.1 | hypothetical protein | - |
| HQ24_RS26655 () | 3057662..3057748 | + | 87 | Protein_2894 | endonuclease | - |
| HQ24_RS15200 () | 3057929..3058240 | - | 312 | WP_000802277.1 | hypothetical protein | - |
| HQ24_RS15205 () | 3058584..3058790 | + | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | - |
| HQ24_RS15210 () | 3059074..3059331 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| HQ24_RS15215 () | 3059565..3059639 | + | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| HQ24_RS15225 () | 3060018..3062114 | - | 2097 | WP_000422420.1 | hypothetical protein | - |
| HQ24_RS15230 () | 3062130..3062681 | - | 552 | WP_001235704.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HQ24_RS15235 () | 3062845..3065853 | + | 3009 | WP_001143750.1 | Tn3 family transposase ISEc63 | Transposase |
| HQ24_RS15240 () | 3066444..3067505 | - | 1062 | WP_001092154.1 | EAL domain-containing protein | - |
| HQ24_RS15245 () | 3067615..3068028 | - | 414 | WP_001351580.1 | hypothetical protein | - |
| HQ24_RS15250 () | 3068192..3068656 | - | 465 | WP_001351581.1 | polymer-forming cytoskeletal protein | - |
| HQ24_RS15255 () | 3068762..3069175 | - | 414 | WP_000483319.1 | hypothetical protein | - |
| HQ24_RS15265 () | 3069778..3069966 | - | 189 | WP_000131420.1 | hypothetical protein | - |
| HQ24_RS26335 () | 3070641..3070775 | + | 135 | Protein_2907 | IS3 family transposase | - |
| HQ24_RS15275 () | 3070873..3072035 | + | 1163 | WP_085955200.1 | IS3 family transposase ISEc17 | Transposase |
| HQ24_RS25840 () | 3072091..3073377 | + | 1287 | Protein_2909 | IS66 family transposase | - |
| HQ24_RS15315 () | 3074708..3075844 | - | 1137 | Protein_2911 | hypothetical protein | - |
| HQ24_RS15325 () | 3076152..3076907 | - | 756 | WP_001301085.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|