MGE detailed information
MGE type: Genomic_island MGE length: 41886 bp
Accession: NZ_CP008801 Location: 2732681..2774566 Organism: Escherichia coli KLY Replicon: chromosome
Accession: NZ_CP008801 Location: 2732681..2774566 Organism: Escherichia coli KLY Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQ24_RS13525 () | 2728317..2729978 | + | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| HQ24_RS13530 () | 2730127..2730468 | + | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| HQ24_RS13535 () | 2730530..2730820 | - | 291 | WP_001117838.1 | RnfH family protein | - |
| HQ24_RS13540 () | 2730810..2731247 | - | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| HQ24_RS13545 () | 2731418..2731900 | + | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| HQ24_RS13550 () | 2732681..2733922 | + | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| HQ24_RS13555 () | 2734166..2735122 | - | 957 | WP_000510827.1 | hypothetical protein | - |
| HQ24_RS13560 () | 2735166..2735378 | + | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| HQ24_RS13565 () | 2735507..2736916 | + | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| HQ24_RS13570 () | 2737069..2737695 | + | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| HQ24_RS13575 () | 2737873..2740062 | - | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| HQ24_RS13580 () | 2740059..2741675 | - | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| HQ24_RS13585 () | 2742035..2742298 | - | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| HQ24_RS13590 () | 2742440..2743513 | + | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| HQ24_RS13595 () | 2743506..2743877 | + | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| HQ24_RS13600 () | 2744232..2745095 | + | 864 | WP_000787597.1 | GTPase family protein | - |
| HQ24_RS13605 () | 2745187..2746008 | + | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| HQ24_RS13610 () | 2746225..2746926 | + | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| HQ24_RS13615 () | 2746967..2747203 | + | 237 | WP_001144029.1 | hypothetical protein | - |
| HQ24_RS13620 () | 2747203..2747646 | + | 444 | WP_000824222.1 | hypothetical protein | - |
| HQ24_RS13625 () | 2747670..2748137 | + | 468 | WP_000702495.1 | hypothetical protein | - |
| HQ24_RS13630 () | 2748362..2748676 | - | 315 | WP_000065803.1 | arsenate reductase | - |
| HQ24_RS13635 () | 2748689..2749698 | - | 1010 | Protein_2604 | arsenic transporter | - |
| HQ24_RS13640 () | 2749840..2751543 | + | 1704 | WP_000896263.1 | hypothetical protein | - |
| HQ24_RS24640 () | 2752115..2752338 | + | 224 | Protein_2606 | DUF905 family protein | - |
| HQ24_RS13645 () | 2752441..2752899 | + | 459 | WP_000211841.1 | antirestriction protein | - |
| HQ24_RS13650 () | 2752908..2753390 | + | 483 | WP_001407480.1 | RadC family protein | - |
| HQ24_RS24645 () | 2753399..2753599 | + | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| HQ24_RS13655 () | 2753637..2753954 | + | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HQ24_RS13660 () | 2753975..2754304 | + | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| HQ24_RS23580 () | 2754668..2759248 | - | 4581 | WP_010723187.1 | putative autotransporter | VF |
| HQ24_RS24650 () | 2759313..2759432 | - | 120 | WP_001120794.1 | hypothetical protein | - |
| HQ24_RS24660 () | 2759587..2759805 | - | 219 | WP_071524906.1 | recombinase family protein | - |
| HQ24_RS26275 () | 2760160..2761533 | - | 1374 | Protein_2615 | DUF5507 domain-containing protein | - |
| HQ24_RS26625 () | 2762919..2765171 | + | 2253 | Protein_2616 | hypothetical protein | - |
| HQ24_RS13715 () | 2765507..2766484 | + | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| HQ24_RS13720 () | 2766504..2767772 | + | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| HQ24_RS13725 () | 2767795..2769243 | + | 1449 | WP_000772831.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| HQ24_RS13730 () | 2769257..2770537 | + | 1281 | WP_001087611.1 | 4-aminobutyrate aminotransferase GabT | VF |
| HQ24_RS13735 () | 2770775..2772175 | + | 1401 | WP_001295173.1 | GABA permease | - |
| HQ24_RS13740 () | 2772196..2772858 | + | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| HQ24_RS13745 () | 2772859..2773308 | - | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| HQ24_RS13750 () | 2773392..2773550 | - | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| HQ24_RS13755 () | 2773733..2774032 | + | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HQ24_RS13760 () | 2774042..2774566 | + | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| HQ24_RS13765 () | 2774613..2775017 | - | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| HQ24_RS13770 () | 2775686..2776135 | + | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| HQ24_RS13775 () | 2776172..2776516 | - | 345 | WP_000281320.1 | DUF2002 family protein | - |
| HQ24_RS13780 () | 2776668..2776997 | + | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| HQ24_RS13785 () | 2777245..2777490 | + | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| HQ24_RS13790 () | 2777487..2777897 | + | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0.007 |