MGE detailed information
MGE type: Prophage MGE length: 25564 bp
Accession: NZ_CP008801 Location: 1603634..1629197 Organism: Escherichia coli KLY Replicon: chromosome
Accession: NZ_CP008801 Location: 1603634..1629197 Organism: Escherichia coli KLY Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQ24_RS07905 () | 1599387..1599779 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| HQ24_RS07910 () | 1600055..1600573 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| HQ24_RS07915 () | 1600617..1602662 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| HQ24_RS07920 () | 1602799..1603545 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| HQ24_RS07925 () | 1603634..1604320 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| HQ24_RS07930 () | 1604497..1604700 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HQ24_RS07935 () | 1604735..1606195 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| HQ24_RS07940 () | 1606284..1607651 | - | 1368 | Protein_1510 | MHS family MFS transporter | - |
| HQ24_RS26180 () | 1608172..1608285 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| HQ24_RS07945 () | 1608354..1608587 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HQ24_RS07950 () | 1608904..1609494 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HQ24_RS07955 () | 1609592..1610167 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| HQ24_RS07960 () | 1610167..1611129 | - | 963 | WP_001027733.1 | phage tail protein | - |
| HQ24_RS07965 () | 1611080..1611649 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| HQ24_RS07970 () | 1612038..1612271 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| HQ24_RS07975 () | 1612329..1612739 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| HQ24_RS07980 () | 1612891..1613064 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HQ24_RS07985 () | 1613236..1613391 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| HQ24_RS26185 () | 1613470..1613535 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| HQ24_RS24275 () | 1613538..1613726 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| HQ24_RS07990 () | 1613737..1613949 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HQ24_RS07995 () | 1614312..1614809 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HQ24_RS08000 () | 1614806..1615339 | - | 534 | WP_001092971.1 | lysozyme | - |
| HQ24_RS08005 () | 1615336..1615647 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| HQ24_RS08010 () | 1615652..1615867 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HQ24_RS08015 () | 1616621..1616836 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| HQ24_RS08020 () | 1617137..1617349 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| HQ24_RS26190 () | 1617404..1617493 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| HQ24_RS08025 () | 1617771..1618523 | - | 753 | WP_001047135.1 | antitermination protein | - |
| HQ24_RS08030 () | 1618537..1619586 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| HQ24_RS08035 () | 1619588..1619866 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| HQ24_RS08040 () | 1619933..1620184 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| HQ24_RS08045 () | 1620401..1620556 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HQ24_RS08050 () | 1620628..1620915 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HQ24_RS08055 () | 1620915..1621154 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HQ24_RS24280 () | 1621179..1621484 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| HQ24_RS08060 () | 1621687..1622019 | + | 333 | WP_001301033.1 | protein FlxA | - |
| HQ24_RS23555 () | 1622456..1622605 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| HQ24_RS08065 () | 1622640..1622918 | - | 279 | Protein_1541 | hypothetical protein | - |
| HQ24_RS08070 () | 1622902..1623132 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| HQ24_RS08075 () | 1623216..1623623 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| HQ24_RS08080 () | 1623790..1623945 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| HQ24_RS08085 () | 1624105..1624323 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| HQ24_RS08095 () | 1624891..1625079 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HQ24_RS08100 () | 1625076..1625267 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| HQ24_RS24295 () | 1625360..1626127 | + | 768 | Protein_1548 | exonuclease | - |
| HQ24_RS08110 () | 1626124..1626819 | + | 696 | Protein_1549 | IS3 family transposase IS2 | Transposase |
| HQ24_RS26200 () | 1626833..1627990 | + | 1158 | Protein_1550 | AMP nucleosidase ; Integrase | Integrase |
| HQ24_RS25655 () | 1628010..1628120 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| HQ24_RS08120 () | 1628178..1629197 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| HQ24_RS08125 () | 1629209..1630423 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| HQ24_RS08130 () | 1630629..1630955 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| HQ24_RS08135 () | 1631090..1631431 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| HQ24_RS08140 () | 1631466..1632026 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HQ24_RS08145 () | 1632029..1632739 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| HQ24_RS08150 () | 1632847..1633152 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.004 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.003 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.004 |