MGE detailed information
MGE type: Prophage MGE length: 47264 bp
Accession: NZ_CP007275 Location: 1170476..1217739 Organism: Escherichia coli strain O18 Replicon: chromosome
Accession: NZ_CP007275 Location: 1170476..1217739 Organism: Escherichia coli strain O18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMECO18_RS06255 () | 1165581..1166231 | + | 651 | WP_001007783.1 | metal-binding protein ZinT | - |
| NMECO18_RS06265 () | 1167301..1167873 | - | 573 | WP_000859544.1 | cytolethal distending toxin type I subunit CdtC | - |
| NMECO18_RS06270 () | 1167870..1168691 | - | 822 | WP_000734593.1 | cytolethal distending toxin type I nuclease subunit CdtB | - |
| NMECO18_RS06275 () | 1168688..1169401 | - | 714 | WP_000358619.1 | cytolethal distending toxin type I subunit CdtA | - |
| NMECO18_RS06280 () | 1169901..1170191 | - | 291 | WP_000355702.1 | hypothetical protein | - |
| NMECO18_RS06285 () | 1170201..1170479 | - | 279 | WP_001204579.1 | hypothetical protein | - |
| NMECO18_RS06290 () | 1170476..1172542 | - | 2067 | WP_047335227.1 | prophage tail fiber N-terminal domain-containing protein | - |
| NMECO18_RS06295 () | 1172607..1173206 | - | 600 | WP_001233170.1 | Outer membrane protein X | VF |
| NMECO18_RS06300 () | 1173274..1176972 | - | 3699 | WP_000515673.1 | DUF1983 domain-containing protein | - |
| NMECO18_RS06305 () | 1177033..1177641 | - | 609 | WP_014639483.1 | tail assembly protein | - |
| NMECO18_RS06310 () | 1177578..1178321 | - | 744 | WP_000140743.1 | C40 family peptidase | - |
| NMECO18_RS06315 () | 1178327..1179025 | - | 699 | WP_001152449.1 | phage minor tail protein L | - |
| NMECO18_RS06320 () | 1179025..1179381 | - | 357 | WP_001330090.1 | phage tail protein | - |
| NMECO18_RS06325 () | 1179359..1182586 | - | 3228 | WP_001552446.1 | phage tail tape measure protein | - |
| NMECO18_RS27110 () | 1182633..1182911 | - | 279 | WP_000978930.1 | DUF4035 domain-containing protein | - |
| NMECO18_RS27115 () | 1182945..1183307 | - | 363 | WP_047335228.1 | phage tail assembly chaperone | - |
| NMECO18_RS06340 () | 1183322..1184026 | - | 705 | WP_047335229.1 | immunoglobulin domain-containing protein | - |
| NMECO18_RS06345 () | 1184087..1184431 | - | 345 | WP_001206306.1 | DUF3168 domain-containing protein | - |
| NMECO18_RS06350 () | 1184428..1184874 | - | 447 | WP_000347792.1 | HK97 gp10 family phage protein | - |
| NMECO18_RS06355 () | 1184874..1185212 | - | 339 | WP_001147814.1 | phage head closure protein | - |
| NMECO18_RS06360 () | 1185221..1185538 | - | 318 | WP_000719066.1 | head-tail connector protein | - |
| NMECO18_RS06365 () | 1185615..1186832 | - | 1218 | WP_000766108.1 | phage major capsid protein | - |
| NMECO18_RS06370 () | 1186847..1187446 | - | 600 | WP_000999828.1 | HK97 family phage prohead protease | - |
| NMECO18_RS06375 () | 1187439..1188665 | - | 1227 | WP_000923131.1 | phage portal protein | - |
| NMECO18_RS27120 () | 1188655..1188816 | - | 162 | WP_000811487.1 | hypothetical protein | - |
| NMECO18_RS06385 () | 1188813..1190570 | - | 1758 | WP_001140907.1 | terminase large subunit | - |
| NMECO18_RS06390 () | 1190570..1191052 | - | 483 | WP_001552442.1 | phage terminase small subunit P27 family | - |
| NMECO18_RS06395 () | 1191200..1191550 | - | 351 | WP_001140099.1 | HNH endonuclease | - |
| NMECO18_RS25440 () | 1191655..1191837 | - | 183 | WP_032145233.1 | Rz1 family lipoprotein | - |
| NMECO18_RS06405 () | 1192054..1192587 | - | 534 | WP_001274714.1 | lysozyme | - |
| NMECO18_RS06410 () | 1192643..1192957 | - | 315 | WP_000193273.1 | YdfR family protein | - |
| NMECO18_RS06415 () | 1192962..1193177 | - | 216 | WP_000839572.1 | class II holin family protein | - |
| NMECO18_RS06440 () | 1193902..1194615 | - | 714 | WP_000342820.1 | hypothetical protein | - |
| NMECO18_RS06445 () | 1194861..1195682 | - | 822 | WP_001235237.1 | antitermination protein | - |
| NMECO18_RS06450 () | 1195679..1196053 | - | 375 | WP_001217427.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NMECO18_RS06455 () | 1196066..1197115 | - | 1050 | WP_001265292.1 | DUF968 domain-containing protein | - |
| NMECO18_RS25445 () | 1197117..1197395 | - | 279 | WP_024193993.1 | hypothetical protein | - |
| NMECO18_RS06465 () | 1197563..1197718 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| NMECO18_RS06470 () | 1197956..1198621 | - | 666 | WP_000150294.1 | epoxyqueuosine reductase QueH | - |
| NMECO18_RS06475 () | 1198796..1199221 | - | 426 | WP_001151152.1 | DUF977 family protein | - |
| NMECO18_RS06480 () | 1199262..1200332 | - | 1071 | WP_001262357.1 | hypothetical protein | - |
| NMECO18_RS06485 () | 1200404..1200829 | - | 426 | WP_000693918.1 | Rha family transcriptional regulator | - |
| NMECO18_RS06490 () | 1200813..1201085 | - | 273 | WP_000887447.1 | helix-turn-helix domain-containing protein | - |
| NMECO18_RS06495 () | 1201195..1201596 | + | 402 | WP_001329851.1 | helix-turn-helix domain-containing protein | - |
| NMECO18_RS06500 () | 1201624..1201815 | + | 192 | WP_000100899.1 | hypothetical protein | Antitoxin Detail |
| NMECO18_RS06505 () | 1201815..1202102 | + | 288 | WP_000936799.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NMECO18_RS06510 () | 1202373..1202525 | + | 153 | WP_000379609.1 | DUF1391 family protein | - |
| NMECO18_RS06515 () | 1202537..1202911 | + | 375 | WP_001553098.1 | hypothetical protein | - |
| NMECO18_RS06520 () | 1202901..1203122 | - | 222 | WP_000202161.1 | hypothetical protein | - |
| NMECO18_RS06530 () | 1203690..1204538 | + | 849 | WP_000935606.1 | Rha family phage regulatory protein | - |
| NMECO18_RS06535 () | 1204584..1204805 | + | 222 | WP_000560231.1 | cell division protein FtsZ | - |
| NMECO18_RS06540 () | 1204949..1207429 | + | 2481 | WP_000048602.1 | exonuclease | - |
| NMECO18_RS06545 () | 1207488..1207691 | + | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| NMECO18_RS06550 () | 1207691..1208716 | + | 1026 | WP_000533613.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NMECO18_RS06560 () | 1208952..1209749 | + | 798 | WP_001350677.1 | DgsA anti-repressor MtfA | - |
| NMECO18_RS06570 () | 1210087..1211349 | + | 1263 | Protein_1251 | Prophage integrase IntA ; Integrase | Integrase |
| NMECO18_RS06575 () | 1211543..1212847 | - | 1305 | WP_000703040.1 | Salicylate synthase | VF |
| NMECO18_RS06580 () | 1212875..1214155 | - | 1281 | WP_001286281.1 | Protein AmpG | VF |
| NMECO18_RS06585 () | 1214148..1215950 | - | 1803 | WP_001304269.1 | Putative multidrug export ATP-binding/permease protein | VF |
| NMECO18_RS06590 () | 1215937..1217649 | - | 1713 | WP_001327954.1 | Iron import ATP-binding/permease protein IrtA | VF |
| NMECO18_RS06595 () | 1217906..1218865 | + | 960 | WP_000140405.1 | yersiniabactin transcriptional regulator YbtA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|