MGE detailed information
MGE type: Prophage MGE length: 36758 bp
Accession: NZ_CP007265 Location: 1460269..1497026 Organism: Escherichia coli strain ST540 Replicon: chromosome
Accession: NZ_CP007265 Location: 1460269..1497026 Organism: Escherichia coli strain ST540 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BU34_RS07325 () | 1456096..1457091 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| BU34_RS07330 () | 1457556..1459694 | + | 2139 | WP_000350635.1 | AAA family ATPase | - |
| BU34_RS07335 () | 1459856..1460272 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | - |
| BU34_RS07340 () | 1460269..1460499 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| BU34_RS07345 () | 1460805..1462885 | + | 2081 | Protein_1393 | hypothetical protein | - |
| BU34_RS07360 () | 1464219..1465259 | + | 1041 | Protein_1395 | hypothetical protein | - |
| BU34_RS07365 () | 1465522..1466655 | + | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| BU34_RS07370 () | 1466675..1466959 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| BU34_RS07375 () | 1466956..1467153 | - | 198 | WP_000215657.1 | hypothetical protein | - |
| BU34_RS07380 () | 1467384..1468373 | - | 990 | Protein_1399 | IS30 family transposase IS30D | Transposase |
| BU34_RS07385 () | 1468438..1469334 | + | 897 | Protein_1400 | IS3 family transposase ISEhe3 | Transposase |
| BU34_RS07390 () | 1469436..1469717 | + | 282 | WP_000639434.1 | hypothetical protein | - |
| BU34_RS25950 () | 1469818..1470515 | - | 698 | Protein_1402 | IS1 family transposase IS1R | Transposase |
| BU34_RS07405 () | 1470625..1471950 | + | 1326 | WP_021512928.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| BU34_RS07410 () | 1472099..1472803 | - | 705 | WP_001505086.1 | IS6 family transposase IS26 | Transposase |
| BU34_RS07415 () | 1472869..1473300 | + | 432 | WP_001707302.1 | hypothetical protein | - |
| BU34_RS07420 () | 1473297..1474088 | + | 792 | WP_000016494.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| BU34_RS07425 () | 1474226..1474501 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| BU34_RS07430 () | 1474495..1475139 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| BU34_RS07435 () | 1475361..1476332 | + | 972 | WP_001103691.1 | hypothetical protein | - |
| BU34_RS07440 () | 1476337..1476729 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| BU34_RS07445 () | 1476734..1478005 | - | 1272 | WP_025269845.1 | Y-family DNA polymerase | - |
| BU34_RS07450 () | 1478005..1478442 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BU34_RS07455 () | 1478439..1478687 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| BU34_RS07460 () | 1479105..1480007 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| BU34_RS25960 () | 1480011..1480315 | + | 305 | Protein_1415 | hypothetical protein | - |
| BU34_RS07470 () | 1480392..1481075 | + | 684 | WP_000086185.1 | DNA methylase | - |
| BU34_RS07475 () | 1481076..1481297 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| BU34_RS07480 () | 1481311..1481745 | + | 435 | WP_025269846.1 | DUF1380 family protein | - |
| BU34_RS07485 () | 1481790..1482560 | + | 771 | WP_025269847.1 | hypothetical protein | - |
| BU34_RS07490 () | 1482638..1483750 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| BU34_RS07500 () | 1484449..1484751 | + | 303 | WP_072128865.1 | antirestriction protein | - |
| BU34_RS07505 () | 1484798..1485219 | + | 422 | Protein_1422 | DUF1380 family protein | - |
| BU34_RS07510 () | 1485216..1485407 | + | 192 | WP_025269849.1 | hypothetical protein | - |
| BU34_RS24525 () | 1485680..1485928 | - | 249 | WP_071781657.1 | hypothetical protein | - |
| BU34_RS07515 () | 1486440..1486670 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| BU34_RS07520 () | 1486722..1488083 | + | 1362 | WP_000199439.1 | DUF3560 domain-containing protein | - |
| BU34_RS07525 () | 1488131..1488694 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| BU34_RS07530 () | 1488720..1488926 | + | 207 | WP_001774176.1 | hypothetical protein | - |
| BU34_RS27355 () | 1489337..1489543 | + | 207 | WP_000275853.1 | hypothetical protein | - |
| BU34_RS07545 () | 1489569..1490108 | + | 540 | WP_000290839.1 | single-stranded DNA-binding protein | - |
| BU34_RS07550 () | 1490171..1490404 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| BU34_RS07555 () | 1490470..1492428 | + | 1959 | WP_025269850.1 | ParB/RepB/Spo0J family partition protein | - |
| BU34_RS07560 () | 1492483..1492917 | + | 435 | WP_001470779.1 | conjugation system SOS inhibitor PsiB | - |
| BU34_RS07565 () | 1492914..1493633 | + | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| BU34_RS27190 () | 1493645..1493833 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 1493645..1493869 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1493645..1493869 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1493645..1493869 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1493645..1493869 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1493802..1493867 | + | 66 | - | - | Antitoxin Detail |
| BU34_RS07575 () | 1493913..1494071 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| BU34_RS27360 () | 1494762..1494968 | + | 207 | WP_000547974.1 | hypothetical protein | - |
| BU34_RS07590 () | 1494993..1495280 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| BU34_RS07595 () | 1495399..1496220 | + | 822 | WP_025269852.1 | DUF945 domain-containing protein | - |
| BU34_RS07600 () | 1496517..1497026 | - | 510 | WP_025269853.1 | hypothetical protein | VF |
| BU34_RS07605 () | 1497441..1497824 | + | 384 | WP_025269854.1 | relaxosome protein TraM | - |
| BU34_RS07610 () | 1498015..1498701 | + | 687 | WP_025269855.1 | PAS domain-containing protein | - |
| BU34_RS07615 () | 1498795..1499022 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| BU34_RS07620 () | 1499056..1499418 | + | 363 | WP_025269856.1 | type IV conjugative transfer system pilin TraA | - |
| BU34_RS07625 () | 1499423..1499734 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| BU34_RS07630 () | 1499756..1500322 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| BU34_RS07635 () | 1500333..1501037 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|