MGE detailed information
MGE type: Genomic_island MGE length: 26521 bp
Accession: NZ_CP006857 Location: 2820484..2847004 Organism: Xanthomonas citri subsp. citri A306 Replicon: chromosome
Accession: NZ_CP006857 Location: 2820484..2847004 Organism: Xanthomonas citri subsp. citri A306 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J151_RS12785 () | 2817406..2817582 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| J151_RS12790 () | 2817802..2818203 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| J151_RS12800 () | 2818492..2819583 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| J151_RS12810 () | 2820484..2822655 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| J151_RS12815 () | 2822665..2823186 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| J151_RS25390 () | 2824051..2825007 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| J151_RS12825 () | 2825074..2826207 | - | 1134 | Protein_2411 | IS5 family transposase | - |
| J151_RS12830 () | 2826247..2827334 | - | 1088 | Protein_2412 | IS3 family transposase | - |
| J151_RS12840 () | 2827547..2827726 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| J151_RS12845 () | 2827997..2828317 | - | 321 | WP_099522003.1 | hypothetical protein | - |
| J151_RS12850 () | 2828314..2828604 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J151_RS12855 () | 2828592..2828870 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| J151_RS12860 () | 2829040..2830308 | - | 1269 | Protein_2417 | transposase | - |
| J151_RS12870 () | 2830357..2831582 | + | 1226 | Protein_2418 | IS3 family transposase | - |
| J151_RS12875 () | 2832218..2833156 | + | 939 | WP_043930788.1 | recombinase family protein | - |
| J151_RS12880 () | 2833346..2835454 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| J151_RS12885 () | 2835505..2835693 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| J151_RS12890 () | 2835690..2837276 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| J151_RS12895 () | 2837273..2838190 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| J151_RS12900 () | 2838199..2838528 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| J151_RS12905 () | 2838632..2839042 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| J151_RS23805 () | 2839065..2839459 | - | 395 | Protein_2426 | relaxase | - |
| J151_RS23810 () | 2839434..2839634 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| J151_RS12915 () | 2840195..2840455 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| J151_RS12920 () | 2840854..2841855 | - | 1002 | WP_011051588.1 | replication protein | - |
| J151_RS12925 () | 2842088..2842321 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| J151_RS12930 () | 2842900..2844294 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| J151_RS12935 () | 2844291..2846408 | + | 2118 | WP_011051591.1 | ATP-binding protein | - |
| J151_RS25395 () | 2846828..2847004 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| J151_RS12945 () | 2847287..2848393 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| J151_RS12950 () | 2848436..2848945 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| J151_RS12955 () | 2848957..2850615 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| J151_RS12960 () | 2850926..2851531 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |