MGE detailed information
MGE type: Prophage MGE length: 52246 bp
Accession: NZ_CP006696 Location: 1675562..1727807 Organism: Xylella fastidiosa subsp. sandyi Ann-1 Replicon: chromosome
Accession: NZ_CP006696 Location: 1675562..1727807 Organism: Xylella fastidiosa subsp. sandyi Ann-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D934_RS07730 () | 1672051..1673619 | + | 1569 | WP_020851183.1 | EAL domain-containing protein | - |
| D934_RS07735 () | 1674022..1675416 | + | 1395 | WP_020851182.1 | LOG family protein YgdH | - |
| D934_RS07740 () | 1675562..1676074 | + | 513 | WP_020851181.1 | Tfp pilus assembly protein FimT/FimU | - |
| D934_RS07745 () | 1676071..1676553 | + | 483 | WP_020851180.1 | type IV pilus modification protein PilV | - |
| D934_RS07750 () | 1676550..1677806 | + | 1257 | WP_020851179.1 | PilW family protein | - |
| D934_RS07755 () | 1677806..1678300 | + | 495 | WP_020851178.1 | fimbrial assembly protein | - |
| D934_RS07760 () | 1678304..1682869 | + | 4566 | WP_024749087.1 | pilus assembly protein | - |
| D934_RS07765 () | 1682866..1683321 | + | 456 | WP_012382713.1 | type IV pilin protein | - |
| D934_RS07775 () | 1683589..1684566 | - | 978 | WP_020852399.1 | tyrosine-type recombinase/integrase | - |
| D934_RS07780 () | 1684568..1684822 | - | 255 | WP_024749085.1 | DUF4224 domain-containing protein | - |
| D934_RS07785 () | 1684800..1685243 | - | 444 | WP_020852400.1 | single-stranded DNA-binding protein | - |
| D934_RS07790 () | 1685301..1686014 | - | 714 | WP_020852401.1 | phage antirepressor KilAC domain-containing protein | - |
| D934_RS07795 () | 1686011..1686619 | - | 609 | WP_020852402.1 | Bro-N domain-containing protein | - |
| D934_RS14465 () | 1686713..1687033 | + | 321 | WP_155266652.1 | hypothetical protein | - |
| D934_RS07800 () | 1686970..1688604 | - | 1635 | WP_042836520.1 | YqaJ viral recombinase family protein | - |
| D934_RS07805 () | 1688601..1689536 | - | 936 | WP_042836522.1 | phage recombination protein Bet | - |
| D934_RS07810 () | 1689552..1690373 | - | 822 | WP_042836523.1 | DUF2303 family protein | - |
| D934_RS07815 () | 1690413..1690757 | - | 345 | WP_042836525.1 | hypothetical protein | - |
| D934_RS07820 () | 1690778..1690969 | - | 192 | WP_024748588.1 | hypothetical protein | - |
| D934_RS13630 () | 1690992..1691270 | - | 279 | WP_080702475.1 | hypothetical protein | - |
| D934_RS07825 () | 1691314..1691505 | - | 192 | WP_004086365.1 | hypothetical protein | - |
| D934_RS07830 () | 1691502..1691909 | - | 408 | WP_042836702.1 | hypothetical protein | - |
| D934_RS07835 () | 1692066..1692590 | + | 525 | WP_042836527.1 | hypothetical protein | - |
| D934_RS07840 () | 1692710..1693114 | + | 405 | WP_042836703.1 | hypothetical protein | - |
| D934_RS13635 () | 1693266..1693469 | + | 204 | WP_080702476.1 | hypothetical protein | - |
| D934_RS13025 () | 1693432..1694229 | + | 798 | WP_020851949.1 | hypothetical protein | - |
| D934_RS07850 () | 1694415..1695395 | - | 981 | WP_164875049.1 | helix-turn-helix transcriptional regulator | - |
| D934_RS13640 () | 1695478..1695732 | + | 255 | WP_080702478.1 | helix-turn-helix domain-containing protein | - |
| D934_RS14780 () | 1695722..1696219 | + | 498 | WP_020851951.1 | hypothetical protein | - |
| D934_RS07865 () | 1696280..1696468 | + | 189 | WP_020851634.1 | hypothetical protein | - |
| D934_RS07870 () | 1696465..1696713 | + | 249 | WP_024748753.1 | hypothetical protein | - |
| D934_RS13655 () | 1696725..1696983 | + | 259 | Protein_1524 | hypothetical protein | - |
| D934_RS14470 () | 1696995..1697636 | + | 642 | WP_020851952.1 | Bro-N domain-containing protein | - |
| D934_RS13665 () | 1697633..1698244 | + | 612 | Protein_1526 | hypothetical protein | - |
| D934_RS07890 () | 1698241..1698831 | + | 591 | WP_020851954.1 | Bro-N domain-containing protein | - |
| D934_RS07895 () | 1698934..1700082 | + | 1149 | WP_042836694.1 | hypothetical protein | - |
| D934_RS07900 () | 1700061..1700339 | + | 279 | WP_020851956.1 | hypothetical protein | - |
| D934_RS07905 () | 1700341..1701183 | + | 843 | WP_020853092.1 | hypothetical protein | - |
| D934_RS07910 () | 1701180..1702640 | + | 1461 | WP_020853093.1 | replicative DNA helicase | - |
| D934_RS07915 () | 1702646..1703071 | + | 426 | WP_020853094.1 | hypothetical protein | - |
| D934_RS07920 () | 1703182..1703882 | + | 701 | Protein_1533 | hypothetical protein | - |
| D934_RS07925 () | 1704071..1704337 | + | 267 | WP_004089577.1 | BrnT family toxin | - |
| D934_RS07930 () | 1704324..1704662 | + | 339 | WP_004089578.1 | BrnA antitoxin family protein | - |
| D934_RS07935 () | 1704866..1705366 | + | 501 | WP_020852372.1 | lysozyme | - |
| D934_RS07940 () | 1705359..1705688 | + | 330 | WP_020852373.1 | phage holin family protein | - |
| D934_RS07945 () | 1705678..1706139 | + | 462 | WP_020852374.1 | hypothetical protein | - |
| D934_RS07950 () | 1706189..1706353 | + | 165 | WP_196242786.1 | hypothetical protein | - |
| D934_RS07955 () | 1706445..1706843 | + | 399 | WP_020852375.1 | hypothetical protein | - |
| D934_RS07960 () | 1706794..1708344 | + | 1551 | WP_020852376.1 | phage terminase large subunit | - |
| D934_RS07965 () | 1708341..1709729 | + | 1389 | WP_196242787.1 | DUF1073 domain-containing protein | - |
| D934_RS07970 () | 1709778..1710059 | - | 282 | WP_020852378.1 | helix-turn-helix domain-containing protein | - |
| D934_RS07975 () | 1710056..1710394 | - | 339 | WP_020852379.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D934_RS07980 () | 1710467..1711312 | + | 846 | WP_020852380.1 | minor capsid protein | - |
| D934_RS07985 () | 1711312..1712520 | + | 1209 | WP_024748896.1 | DUF2213 domain-containing protein | - |
| D934_RS07990 () | 1712530..1713012 | + | 483 | WP_020852382.1 | hypothetical protein | - |
| D934_RS07995 () | 1713022..1714005 | + | 984 | WP_024748895.1 | DUF2184 domain-containing protein | - |
| D934_RS08000 () | 1714068..1714421 | + | 354 | WP_020852384.1 | hypothetical protein | - |
| D934_RS08005 () | 1714421..1714789 | + | 369 | WP_024748894.1 | DUF4054 domain-containing protein | - |
| D934_RS08010 () | 1714786..1715265 | + | 480 | WP_024748893.1 | hypothetical protein | - |
| D934_RS08015 () | 1715240..1715620 | + | 381 | WP_020852387.1 | hypothetical protein | - |
| D934_RS08020 () | 1715544..1716077 | + | 534 | WP_020852388.1 | hypothetical protein | - |
| D934_RS08025 () | 1716078..1717574 | + | 1497 | WP_020852389.1 | DUF3383 domain-containing protein | - |
| D934_RS08030 () | 1717584..1718021 | + | 438 | WP_004087249.1 | DUF3277 family protein | - |
| D934_RS08035 () | 1718018..1718440 | + | 423 | WP_020851660.1 | hypothetical protein | - |
| D934_RS08040 () | 1718588..1720477 | + | 1890 | WP_020851659.1 | phage-related protein | - |
| D934_RS08045 () | 1720488..1720892 | - | 405 | WP_024748528.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| D934_RS08050 () | 1720889..1721161 | - | 273 | WP_024748527.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| D934_RS08055 () | 1721321..1722091 | + | 771 | WP_020851656.1 | hypothetical protein | - |
| D934_RS08060 () | 1722091..1722408 | + | 318 | WP_020851655.1 | hypothetical protein | - |
| D934_RS08065 () | 1722405..1723235 | + | 831 | WP_020851654.1 | hypothetical protein | - |
| D934_RS08070 () | 1723232..1723873 | + | 642 | WP_020851653.1 | phage-related protein | - |
| D934_RS08075 () | 1723870..1724223 | + | 354 | WP_020851652.1 | hypothetical protein | - |
| D934_RS08080 () | 1724234..1724539 | - | 306 | WP_004089254.1 | putative addiction module antidote protein | Antitoxin Detail |
| D934_RS08085 () | 1724543..1724839 | - | 297 | WP_004089252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D934_RS08090 () | 1724938..1726083 | + | 1146 | WP_020851651.1 | baseplate J/gp47 family protein | - |
| D934_RS08095 () | 1726080..1726640 | + | 561 | WP_020851650.1 | DUF2612 domain-containing protein | - |
| D934_RS08100 () | 1726644..1727807 | + | 1164 | WP_020851649.1 | phage tail protein | - |
| D934_RS08105 () | 1727946..1728386 | - | 441 | WP_024749309.1 | helix-turn-helix domain-containing protein | - |
| D934_RS14475 () | 1728389..1728595 | - | 207 | WP_155244291.1 | DUF4258 domain-containing protein | - |
| D934_RS08110 () | 1729190..1729383 | + | 194 | Protein_1572 | hypothetical protein | - |
| D934_RS08120 () | 1729749..1729940 | + | 192 | WP_024749307.1 | hypothetical protein | - |
| D934_RS08125 () | 1730552..1731025 | - | 474 | WP_004089938.1 | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|