MGE detailed information
MGE type: Prophage MGE length: 45189 bp
Accession: NZ_CP003181 Location: 1555282..1600470 Organism: Granulibacter bethesdensis strain NIH3.1 Replicon: chromosome
Accession: NZ_CP003181 Location: 1555282..1600470 Organism: Granulibacter bethesdensis strain NIH3.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBCGDNIH3_RS07125 () | 1551020..1551871 | + | 852 | WP_038515531.1 | DUF2272 domain-containing protein | - |
| GBCGDNIH3_RS07130 () | 1551915..1552340 | - | 426 | WP_173656025.1 | rhodanese-like domain-containing protein | - |
| GBCGDNIH3_RS07135 () | 1552509..1553528 | + | 1020 | WP_025286790.1 | cysteine synthase A | - |
| GBCGDNIH3_RS07140 () | 1553609..1554154 | - | 546 | WP_025286791.1 | hypothetical protein | - |
| GBCGDNIH3_RS07145 () | 1554351..1555322 | + | 972 | WP_025286792.1 | class II fructose-bisphosphatase | - |
| GBCGDNIH3_RS07150 () | 1555327..1557177 | + | 1851 | WP_095532114.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| GBCGDNIH3_RS12720 () | 1557384..1557878 | - | 495 | WP_164504159.1 | hypothetical protein ; Integrase | Integrase |
| GBCGDNIH3_RS07165 () | 1558292..1558597 | - | 306 | WP_072632652.1 | IS607 family transposase ISC1913 | Transposase |
| GBCGDNIH3_RS07170 () | 1558663..1558908 | - | 246 | WP_038515535.1 | hypothetical protein | - |
| GBCGDNIH3_RS07175 () | 1558911..1559132 | - | 222 | WP_125918899.1 | hypothetical protein | - |
| GBCGDNIH3_RS12575 () | 1559129..1559317 | - | 189 | WP_125918900.1 | hypothetical protein | - |
| GBCGDNIH3_RS07180 () | 1559314..1559709 | - | 396 | WP_025286798.1 | hypothetical protein | - |
| GBCGDNIH3_RS12580 () | 1559740..1560117 | + | 378 | WP_164504160.1 | hypothetical protein | - |
| GBCGDNIH3_RS07185 () | 1560371..1561069 | - | 699 | WP_038515540.1 | helix-turn-helix domain-containing protein | - |
| GBCGDNIH3_RS07190 () | 1561634..1562110 | + | 477 | WP_025286799.1 | hypothetical protein | - |
| GBCGDNIH3_RS07195 () | 1562107..1562544 | + | 438 | WP_025286800.1 | hypothetical protein | - |
| GBCGDNIH3_RS07200 () | 1562531..1563607 | + | 1077 | WP_164504161.1 | toprim domain-containing protein | - |
| GBCGDNIH3_RS07205 () | 1563600..1565435 | + | 1836 | WP_025286802.1 | hypothetical protein | - |
| GBCGDNIH3_RS07210 () | 1565685..1566365 | + | 681 | WP_072632653.1 | hypothetical protein | - |
| GBCGDNIH3_RS07215 () | 1566505..1567164 | + | 660 | WP_164504162.1 | terminase small subunit | - |
| GBCGDNIH3_RS07220 () | 1567157..1569325 | + | 2169 | WP_025286805.1 | phage terminase large subunit family protein | - |
| GBCGDNIH3_RS07225 () | 1569322..1569546 | + | 225 | WP_025286806.1 | hypothetical protein | - |
| GBCGDNIH3_RS07230 () | 1569553..1571091 | + | 1539 | WP_025286807.1 | phage portal protein | - |
| GBCGDNIH3_RS07235 () | 1571088..1572587 | + | 1500 | WP_025286808.1 | S49 family peptidase | - |
| GBCGDNIH3_RS07240 () | 1572589..1572951 | + | 363 | WP_025286809.1 | head decoration protein | - |
| GBCGDNIH3_RS07245 () | 1573006..1574094 | + | 1089 | WP_025286810.1 | major capsid protein | - |
| GBCGDNIH3_RS07250 () | 1574091..1574444 | + | 354 | WP_025286811.1 | hypothetical protein | - |
| GBCGDNIH3_RS07255 () | 1574437..1574892 | + | 456 | WP_025286812.1 | hypothetical protein | - |
| GBCGDNIH3_RS07260 () | 1574945..1576111 | + | 1167 | WP_025286813.1 | hypothetical protein | - |
| GBCGDNIH3_RS07270 () | 1576346..1576579 | - | 234 | WP_025286814.1 | hypothetical protein | - |
| GBCGDNIH3_RS07275 () | 1576675..1577436 | + | 762 | WP_125918903.1 | hypothetical protein | - |
| GBCGDNIH3_RS07280 () | 1577605..1577784 | - | 180 | WP_072632655.1 | hypothetical protein | - |
| GBCGDNIH3_RS07285 () | 1577836..1578528 | + | 693 | WP_025286816.1 | hypothetical protein | - |
| GBCGDNIH3_RS07290 () | 1578585..1578767 | + | 183 | WP_025286817.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GBCGDNIH3_RS07295 () | 1578784..1579179 | + | 396 | WP_025286818.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GBCGDNIH3_RS07300 () | 1579659..1579952 | - | 294 | WP_072632656.1 | Arc family DNA-binding protein | - |
| GBCGDNIH3_RS07310 () | 1580306..1581055 | + | 750 | WP_081371632.1 | phage regulatory protein/antirepressor Ant | - |
| GBCGDNIH3_RS07315 () | 1581055..1581426 | + | 372 | WP_025286821.1 | hypothetical protein | - |
| GBCGDNIH3_RS07320 () | 1581490..1581822 | - | 333 | WP_025286822.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| GBCGDNIH3_RS07325 () | 1581819..1582073 | - | 255 | WP_025286823.1 | type II toxin-antitoxin system HicA family toxin | - |
| GBCGDNIH3_RS07330 () | 1582146..1587116 | + | 4971 | WP_025286824.1 | hypothetical protein | - |
| GBCGDNIH3_RS07335 () | 1587187..1587531 | + | 345 | WP_025286825.1 | transcriptional regulator | - |
| GBCGDNIH3_RS07345 () | 1588061..1588813 | + | 753 | WP_025286826.1 | phage antirepressor KilAC domain-containing protein | - |
| GBCGDNIH3_RS07350 () | 1588813..1589184 | + | 372 | WP_025286827.1 | hypothetical protein | - |
| GBCGDNIH3_RS07355 () | 1589225..1589467 | - | 243 | WP_025286828.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| GBCGDNIH3_RS07360 () | 1589820..1590134 | - | 315 | WP_025286829.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| GBCGDNIH3_RS07365 () | 1590147..1590425 | - | 279 | WP_025286830.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GBCGDNIH3_RS07370 () | 1590526..1592184 | + | 1659 | WP_025286831.1 | hypothetical protein | - |
| GBCGDNIH3_RS07375 () | 1592184..1592987 | + | 804 | WP_025286832.1 | hypothetical protein | - |
| GBCGDNIH3_RS07380 () | 1593008..1594318 | + | 1311 | WP_164504163.1 | tail fiber domain-containing protein | - |
| GBCGDNIH3_RS07385 () | 1594337..1594831 | + | 495 | WP_025286834.1 | hypothetical protein | - |
| GBCGDNIH3_RS12585 () | 1594833..1595825 | + | 993 | WP_051496890.1 | hypothetical protein | - |
| GBCGDNIH3_RS07395 () | 1595834..1596076 | + | 243 | WP_125918905.1 | hypothetical protein | - |
| GBCGDNIH3_RS07400 () | 1596089..1596496 | + | 408 | WP_025286837.1 | hypothetical protein | - |
| GBCGDNIH3_RS12725 () | 1596544..1596744 | - | 201 | WP_051496891.1 | hypothetical protein | - |
| GBCGDNIH3_RS07410 () | 1596761..1597306 | + | 546 | WP_051496892.1 | hypothetical protein | - |
| GBCGDNIH3_RS07415 () | 1597322..1597729 | + | 408 | WP_025286839.1 | hypothetical protein | - |
| GBCGDNIH3_RS12590 () | 1597827..1598234 | - | 408 | WP_125918906.1 | hypothetical protein | - |
| GBCGDNIH3_RS07420 () | 1598392..1599039 | - | 648 | WP_025286840.1 | S-adenosylmethionine-binding protein | - |
| GBCGDNIH3_RS07425 () | 1599023..1599892 | - | 870 | WP_025286841.1 | hypothetical protein | - |
| GBCGDNIH3_RS07430 () | 1599889..1600470 | - | 582 | WP_025286842.1 | Tn3 family transposase TnBth3 | Transposase |
| GBCGDNIH3_RS07440 () | 1601157..1604207 | + | 3051 | WP_081371634.1 | type II CRISPR RNA-guided endonuclease Cas9 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|