MGE detailed information
MGE type: Conjugative plasmid MGE length: 138038 bp
Accession: NZ_AP027979 Location: 1..138038 Organism: Escherichia coli strain VE-V11-M Replicon: plasmid pVE-V11-M_1
Accession: NZ_AP027979 Location: 1..138038 Organism: Escherichia coli strain VE-V11-M Replicon: plasmid pVE-V11-M_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQK36_RS22495 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| QQK36_RS22500 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| QQK36_RS22505 (2124) | 2124..2312 | - | 189 | WP_001324033.1 | hypothetical protein | - |
| QQK36_RS22510 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| QQK36_RS22515 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| QQK36_RS22520 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| QQK36_RS22525 (6256) | 6256..6645 | + | 390 | WP_032145261.1 | IS110 family transposase ISEc20 | Transposase |
| QQK36_RS22530 (7450) | 7450..7629 | - | 180 | Protein_7 | integrase core domain-containing protein | - |
| QQK36_RS22535 (7768) | 7768..8967 | + | 1200 | Protein_8 | IS3 family transposase IS629 | Transposase |
| QQK36_RS22540 (9115) | 9115..9440 | - | 326 | Protein_9 | IS3 family transposase ISLad1 | Transposase |
| QQK36_RS22545 (9486) | 9486..9826 | + | 341 | Protein_10 | IS3 family transposase | - |
| QQK36_RS22550 (10421) | 10421..11608 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| QQK36_RS22555 (11605) | 11605..13545 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| QQK36_RS22560 (13549) | 13549..14919 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| QQK36_RS22565 (15393) | 15393..15587 | + | 195 | Protein_14 | IS200-IS605 family transposase IS200C | Transposase |
| QQK36_RS22570 (15716) | 15716..16657 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| QQK36_RS22575 (16892) | 16892..18281 | - | 1390 | Protein_16 | ISNCY family transposase ISKpn21 | Transposase |
| QQK36_RS22580 (18591) | 18591..18740 | - | 150 | Protein_17 | IS3 family transposase IS2 | Transposase |
| QQK36_RS22585 (18918) | 18918..20111 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| QQK36_RS22595 (23206) | 23206..23499 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| QQK36_RS22600 (23557) | 23557..23756 | - | 200 | Protein_21 | lysis protein | - |
| QQK36_RS22605 (24310) | 24310..25334 | + | 1025 | Protein_22 | integrase core domain-containing protein | - |
| QQK36_RS22610 (26645) | 26645..27760 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| QQK36_RS22615 (27900) | 27900..31559 | + | 3660 | WP_001389363.1 | Multidrug efflux ATP-binding/permease protein | VF |
| QQK36_RS22620 (31663) | 31663..32892 | + | 1230 | WP_000933678.1 | Enterochelin esterase | VF |
| QQK36_RS22625 (32977) | 32977..33933 | + | 957 | WP_000271274.1 | Ferri-bacillibactin esterase BesA | VF |
| QQK36_RS22630 (33978) | 33978..36155 | - | 2178 | WP_001222185.1 | Ferric enterobactin receptor | VF |
| QQK36_RS22635 (37021) | 37021..38055 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| QQK36_RS22640 (38236) | 38236..38537 | + | 302 | Protein_29 | hypothetical protein | - |
| QQK36_RS22645 (38615) | 38615..38908 | - | 294 | WP_000269327.1 | DUF6404 family protein | - |
| QQK36_RS22650 (39076) | 39076..39201 | - | 126 | Protein_31 | type II toxin-antitoxin system toxin YacB | - |
| QQK36_RS22655 (39201) | 39201..39469 | - | 269 | Protein_32 | type II toxin-antitoxin system antitoxin YacA | - |
| QQK36_RS22660 (40080) | 40080..41354 | + | 1275 | WP_000489609.1 | HlyD family secretion protein | - |
| QQK36_RS22665 (41347) | 41347..43492 | + | 2146 | Protein_34 | peptidase domain-containing ABC transporter | - |
| QQK36_RS22670 (43893) | 43893..44134 | - | 242 | Protein_35 | colicin V immunity protein | - |
| QQK36_RS22675 (44663) | 44663..44857 | - | 195 | Protein_36 | hypothetical protein | - |
| QQK36_RS22680 (45203) | 45203..45749 | - | 547 | Protein_37 | colicin immunity protein Cui | - |
| QQK36_RS22685 (46893) | 46893..47172 | - | 280 | Protein_38 | hypothetical protein | - |
| QQK36_RS22690 (47344) | 47344..48027 | + | 684 | Protein_39 | IS6 family transposase IS15DI | Transposase |
| QQK36_RS22695 (48529) | 48529..48615 | + | 87 | WP_286611929.1 | hypothetical protein | - |
| QQK36_RS22700 (48672) | 48672..49819 | - | 1148 | Protein_41 | Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter | - |
| QQK36_RS22705 (50010) | 50010..50420 | + | 411 | WP_286611931.1 | TetR/AcrR family transcriptional regulator C-terminal domain-containing protein | - |
| QQK36_RS22710 (50574) | 50574..50806 | - | 233 | Protein_43 | relaxase | - |
| QQK36_RS22715 (51186) | 51186..52009 | - | 824 | Protein_44 | aminoglycoside phosphotransferase family protein | - |
| QQK36_RS22720 (52009) | 52009..52790 | - | 782 | Protein_45 | APH(3'') family aminoglycoside O-phosphotransferase | - |
| QQK36_RS22725 (52806) | 52806..53662 | - | 857 | Protein_46 | dihydropteroate synthase | - |
| QQK36_RS22730 (53864) | 53864..54759 | - | 896 | Protein_47 | class A beta-lactamase | - |
| QQK36_RS22735 (54937) | 54937..55206 | - | 270 | Protein_48 | helix-turn-helix domain-containing protein | - |
| QQK36_RS22740 (55332) | 55332..56025 | + | 694 | Protein_49 | IS6 family transposase | - |
| QQK36_RS22745 (55999) | 55999..56945 | - | 947 | Protein_50 | IS4 family transposase | - |
| QQK36_RS22750 (57083) | 57083..57874 | + | 792 | Protein_51 | AAC(3) family N-acetyltransferase | - |
| QQK36_RS22755 (57976) | 57976..58462 | + | 487 | Protein_52 | tunicamycin resistance protein | - |
| QQK36_RS22760 (59270) | 59270..59363 | + | 94 | Protein_53 | hypothetical protein | - |
| QQK36_RS22765 (59403) | 59403..60576 | + | 1174 | Protein_54 | DUF3883 domain-containing protein | - |
| QQK36_RS22770 (60594) | 60594..61989 | + | 1396 | Protein_55 | IS1182 family transposase | - |
| QQK36_RS22775 (62618) | 62618..62776 | - | 159 | Protein_56 | chromate resistance protein | - |
| QQK36_RS22780 (62892) | 62892..62975 | + | 84 | Protein_57 | hypothetical protein | - |
| QQK36_RS22785 (63050) | 63050..64277 | + | 1228 | Protein_58 | transposase family protein | - |
| QQK36_RS22790 (64344) | 64344..65035 | + | 692 | Protein_59 | IS6 family transposase | - |
| QQK36_RS22795 (65097) | 65097..65456 | - | 360 | Protein_60 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase | - |
| QQK36_RS22800 (65587) | 65587..66060 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| QQK36_RS22805 (66216) | 66216..67229 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| QQK36_RS22810 (67608) | 67608..67811 | + | 204 | WP_286611933.1 | DUF3330 domain-containing protein | - |
| QQK36_RS22815 (67937) | 67937..68065 | + | 129 | Protein_64 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| QQK36_RS22820 (68118) | 68118..68822 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QQK36_RS22825 (68939) | 68939..69339 | - | 401 | Protein_66 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QQK36_RS22830 (69272) | 69272..69529 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QQK36_RS22835 (69621) | 69621..69917 | - | 297 | WP_072666786.1 | CPBP family intramembrane metalloprotease | - |
| QQK36_RS22840 (69914) | 69914..70273 | - | 360 | WP_134906486.1 | histidine phosphatase family protein | - |
| QQK36_RS22845 (71210) | 71210..72067 | - | 858 | WP_286611902.1 | incFII family plasmid replication initiator RepA | - |
| QQK36_RS22850 (72060) | 72060..72542 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| QQK36_RS22855 (72535) | 72535..72582 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| QQK36_RS22860 (72573) | 72573..72824 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| QQK36_RS22865 (72841) | 72841..73098 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| QQK36_RS22870 (73382) | 73382..73531 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (73575) | 73575..73636 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (73575) | 73575..73636 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (73575) | 73575..73636 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (73575) | 73575..73636 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| QQK36_RS22875 (73892) | 73892..73966 | - | 75 | Protein_76 | endonuclease | - |
| QQK36_RS22880 (74212) | 74212..74424 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| QQK36_RS22885 (74560) | 74560..75120 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| QQK36_RS22890 (75223) | 75223..76083 | - | 861 | WP_237442101.1 | putative protein YcjY | VF |
| QQK36_RS22895 (76142) | 76142..76888 | - | 747 | WP_284330307.1 | conjugal transfer pilus acetylase TraX | - |
| QQK36_RS22900 (76908) | 76908..82178 | - | 5271 | WP_286611935.1 | Multifunctional conjugation protein TraI | Relaxase |
| QQK36_RS22905 (82260) | 82260..82487 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| QQK36_RS22910 (82487) | 82487..82885 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QQK36_RS22915 (82894) | 82894..84528 | - | 1635 | Protein_84 | type IV conjugative transfer system coupling protein TraD | - |
| QQK36_RS22920 (84841) | 84841..85572 | - | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| QQK36_RS22925 (85621) | 85621..86106 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| QQK36_RS22930 (86122) | 86122..88944 | - | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QQK36_RS22935 (88941) | 88941..89678 | - | 738 | Protein_88 | conjugal transfer protein TraH | - |
| QQK36_RS22940 (89981) | 89981..90367 | - | 387 | WP_000099691.1 | type-F conjugative transfer system protein TrbI | - |
| QQK36_RS22945 (90364) | 90364..92991 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| QQK36_RS22950 (93151) | 93151..93372 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| QQK36_RS22955 (93507) | 93507..94022 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QQK36_RS22960 (94019) | 94019..94270 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| QQK36_RS22965 (94282) | 94282..94479 | - | 198 | WP_024179215.1 | conjugal transfer protein TrbD | - |
| QQK36_RS22970 (94466) | 94466..95056 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QQK36_RS22975 (95046) | 95046..96473 | - | 1428 | WP_286611911.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QQK36_RS22980 (96473) | 96473..97201 | - | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| QQK36_RS22985 (97188) | 97188..97754 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| QQK36_RS22990 (97776) | 97776..98087 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| QQK36_RS22995 (98102) | 98102..98467 | - | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| QQK36_RS23000 (98510) | 98510..98725 | - | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| QQK36_RS23005 (98861) | 98861..99508 | - | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| QQK36_RS23010 (99700) | 99700..100083 | - | 384 | WP_001063020.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QQK36_RS23015 (100423) | 100423..101025 | + | 603 | WP_077248356.1 | hypothetical protein | VF |
| QQK36_RS23020 (101320) | 101320..102141 | - | 822 | WP_001234475.1 | DUF932 domain-containing protein | - |
| QQK36_RS23025 (102260) | 102260..102547 | - | 288 | WP_000107520.1 | hypothetical protein | - |
| QQK36_RS23030 (102847) | 102847..103144 | + | 298 | Protein_107 | hypothetical protein | - |
| QQK36_RS23035 (103445) | 103445..103567 | - | 123 | WP_223195199.1 | Hok/Gef family protein | Toxin Detail |
| QQK36_RS23040 (103512) | 103512..103625 | - | 114 | Protein_109 | DUF5431 family protein | - |
| - (103659) | 103659..103867 | - | 209 | NuclAT_0 | - | Antitoxin Detail |
| - (103659) | 103659..103867 | - | 209 | NuclAT_0 | - | Antitoxin Detail |
| - (103659) | 103659..103867 | - | 209 | NuclAT_0 | - | Antitoxin Detail |
| - (103659) | 103659..103867 | - | 209 | NuclAT_0 | - | Antitoxin Detail |
| QQK36_RS23045 (103812) | 103812..104598 | - | 787 | Protein_110 | plasmid SOS inhibition protein A | - |
| QQK36_RS23050 (104595) | 104595..105029 | - | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| QQK36_RS23055 (105084) | 105084..107040 | - | 1957 | Protein_112 | ParB/RepB/Spo0J family partition protein | - |
| QQK36_RS23060 (107104) | 107104..107335 | - | 232 | Protein_113 | DUF905 family protein | - |
| QQK36_RS23065 (107393) | 107393..107932 | - | 540 | WP_286611915.1 | single-stranded DNA-binding protein | - |
| QQK36_RS23070 (107958) | 107958..108164 | - | 207 | WP_000547940.1 | hypothetical protein | - |
| QQK36_RS23075 (108233) | 108233..108657 | + | 425 | Protein_116 | hypothetical protein | - |
| QQK36_RS23080 (108747) | 108747..109277 | - | 531 | WP_099721888.1 | class I SAM-dependent methyltransferase | - |
| QQK36_RS23085 (109355) | 109355..110713 | - | 1359 | WP_286611917.1 | DUF3560 domain-containing protein | - |
| QQK36_RS23090 (110765) | 110765..110993 | - | 229 | Protein_119 | hypothetical protein | - |
| QQK36_RS23095 (111508) | 111508..111802 | + | 295 | Protein_120 | hypothetical protein | - |
| QQK36_RS23100 (111978) | 111978..112160 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| QQK36_RS23105 (112160) | 112160..112621 | - | 462 | WP_050439867.1 | DUF1380 family protein | - |
| QQK36_RS23110 (112621) | 112621..113047 | - | 427 | Protein_123 | antirestriction protein | - |
| QQK36_RS23115 (113448) | 113448..114419 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| QQK36_RS23120 (114679) | 114679..114891 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| QQK36_RS23125 (114904) | 114904..115254 | - | 351 | WP_286611919.1 | hypothetical protein | - |
| QQK36_RS23130 (115546) | 115546..115884 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| QQK36_RS23135 (115890) | 115890..116059 | - | 170 | Protein_128 | hypothetical protein | - |
| QQK36_RS23140 (116653) | 116653..117621 | - | 969 | Protein_129 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QQK36_RS23145 (117621) | 117621..118783 | - | 1163 | Protein_130 | plasmid-partitioning protein SopA | - |
| QQK36_RS23150 (119082) | 119082..119789 | - | 708 | Protein_131 | IS1 family transposase IS1A | Transposase |
| QQK36_RS23155 (120308) | 120308..122509 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| QQK36_RS23160 (122535) | 122535..123868 | - | 1334 | Protein_133 | L-lysine N6-monooxygenase | VF |
| QQK36_RS23165 (123865) | 123865..125607 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| QQK36_RS23170 (125607) | 125607..126554 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| QQK36_RS23175 (126555) | 126555..128279 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| QQK36_RS23180 (128415) | 128415..129608 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| QQK36_RS23185 (129988) | 129988..130368 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| QQK36_RS23190 (130709) | 130709..131122 | - | 414 | Protein_139 | phosphopyruvate hydratase | - |
| QQK36_RS23195 (131120) | 131120..131377 | + | 258 | Protein_140 | Tn3 family transposase | - |
| QQK36_RS23200 (131611) | 131611..132468 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| QQK36_RS23205 (132465) | 132465..133322 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| QQK36_RS23210 (133319) | 133319..134147 | - | 829 | Protein_143 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| QQK36_RS23215 (134147) | 134147..135059 | - | 913 | Protein_144 | Periplasmic chelated iron-binding protein YfeA | VF |
| QQK36_RS23220 (135414) | 135414..136110 | + | 697 | Protein_145 | IS1-like element IS1A family transposase | - |
| QQK36_RS23225 (136290) | 136290..136803 | - | 514 | Protein_146 | DUF4113 domain-containing protein | - |
| QQK36_RS23230 (136864) | 136864..136968 | - | 105 | Protein_147 | AAA family ATPase | - |
| QQK36_RS23235 (136970) | 136970..137293 | - | 324 | Protein_148 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|