MGE detailed information
MGE type: Genomic_island MGE length: 9357 bp
Accession: NZ_AP027445 Location: 4111547..4120903 Organism: Escherichia coli strain EC291 isolate EC291 Replicon: chromosome
Accession: NZ_AP027445 Location: 4111547..4120903 Organism: Escherichia coli strain EC291 isolate EC291 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE55_RS21950 (4106708) | 4106708..4108009 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| QUE55_RS21955 (4108125) | 4108125..4108463 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| QUE55_RS21960 (4108439) | 4108439..4110136 | + | 1698 | WP_000068928.1 | protein-disulfide reductase DsbD | - |
| QUE55_RS21965 (4110173) | 4110173..4110748 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QUE55_RS21975 (4111547) | 4111547..4113085 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QUE55_RS21980 (4113451) | 4113451..4114785 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QUE55_RS21985 (4114865) | 4114865..4117012 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QUE55_RS21990 (4117071) | 4117071..4118528 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| QUE55_RS21995 (4118765) | 4118765..4120282 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QUE55_RS22000 (4120406) | 4120406..4120579 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QUE55_RS22005 (4120607) | 4120607..4120903 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QUE55_RS22010 (4121130) | 4121130..4121402 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| QUE55_RS22015 (4121414) | 4121414..4121644 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QUE55_RS22020 (4121825) | 4121825..4123456 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| QUE55_RS22025 (4123453) | 4123453..4124172 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.005 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.005 |