MGE detailed information
MGE type: Conjugative plasmid MGE length: 98615 bp
Accession: NZ_AP027444 Location: 1..98615 Organism: Escherichia coli strain EC291 isolate EC291 Replicon: plasmid pEC291_1
Accession: NZ_AP027444 Location: 1..98615 Organism: Escherichia coli strain EC291 isolate EC291 Replicon: plasmid pEC291_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE55_RS01025 (414) | 414..1118 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QUE55_RS01030 (1172) | 1172..1453 | - | 282 | Protein_2 | DUF3330 domain-containing protein | - |
| QUE55_RS01035 (1656) | 1656..2669 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| QUE55_RS01040 (2814) | 2814..3311 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| QUE55_RS01045 (3423) | 3423..3713 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| QUE55_RS01050 (3719) | 3719..4557 | + | 839 | Protein_6 | Streptomycin 3''-adenylyltransferase | ARG |
| QUE55_RS01055 (4772) | 4772..6031 | + | 1260 | WP_000095725.1 | Bicyclomycin resistance protein | ARG |
| QUE55_RS01060 (6275) | 6275..7509 | - | 1235 | Protein_8 | MFS transporter | - |
| QUE55_RS01065 (7506) | 7506..9149 | - | 1644 | WP_053821788.1 | Phosphoethanolamine transferase EptA | VF |
| QUE55_RS01070 (9168) | 9168..9710 | - | 543 | WP_099357097.1 | chromate resistance protein ChrB | - |
| QUE55_RS01075 (9946) | 9946..10137 | + | 192 | Protein_11 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| QUE55_RS01080 (10190) | 10190..10894 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QUE55_RS01085 (10906) | 10906..11046 | - | 141 | WP_020219413.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QUE55_RS01090 (11210) | 11210..11767 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QUE55_RS01095 (11950) | 11950..12810 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QUE55_RS01100 (12975) | 12975..13193 | + | 219 | Protein_16 | IS1 family transposase IS1X2 | Transposase |
| QUE55_RS01105 (13205) | 13205..13696 | + | 492 | Protein_17 | Murein DD-endopeptidase MepM | VF |
| QUE55_RS01110 (13730) | 13730..13927 | - | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| QUE55_RS01115 (13968) | 13968..16445 | - | 2478 | WP_001398208.1 | Ag(+)-translocating P-type ATPase SilP | - |
| QUE55_RS01120 (16543) | 16543..16983 | - | 441 | WP_000758229.1 | DUF411 domain-containing protein | - |
| QUE55_RS01125 (17070) | 17070..20216 | - | 3147 | WP_032192694.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| QUE55_RS01130 (20227) | 20227..21519 | - | 1293 | WP_001381488.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| QUE55_RS01135 (21633) | 21633..21986 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| QUE55_RS01140 (22014) | 22014..23399 | - | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| QUE55_RS01145 (23589) | 23589..24269 | + | 681 | WP_000697969.1 | Transcriptional regulatory protein CusR | VF |
| QUE55_RS01150 (24262) | 24262..25737 | + | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| QUE55_RS01155 (25988) | 25988..26419 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| QUE55_RS01160 (26563) | 26563..26871 | + | 309 | WP_025670887.1 | DUF305 domain-containing protein | - |
| QUE55_RS01165 (27308) | 27308..27309 | - | 2 | WP_001390281.1 | IS1 family transposase IS1R | Transposase |
| QUE55_RS01170 (27780) | 27780..28931 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| QUE55_RS01175 (28941) | 28941..29846 | + | 906 | Protein_31 | IS3 family transposase IS911 | Transposase |
| QUE55_RS01180 (29929) | 29929..30186 | + | 258 | WP_000177057.1 | hypothetical protein | - |
| QUE55_RS01185 (30744) | 30744..31511 | - | 768 | WP_000175457.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| QUE55_RS01190 (31512) | 31512..32468 | - | 957 | WP_000684856.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| QUE55_RS01195 (32465) | 32465..33463 | - | 999 | WP_000125187.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| QUE55_RS01200 (33460) | 33460..34362 | - | 903 | WP_000879160.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| QUE55_RS01205 (34407) | 34407..36731 | - | 2325 | WP_001541949.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| QUE55_RS01210 (36818) | 36818..37771 | - | 954 | WP_001541950.1 | ferric citrate uptake sigma factor regulator FecR | - |
| QUE55_RS01215 (37768) | 37768..38289 | - | 522 | WP_001541951.1 | putative RNA polymerase sigma factor FecI | VF |
| QUE55_RS01220 (38426) | 38426..38494 | + | 69 | WP_211180522.1 | protein YkiE | - |
| QUE55_RS01225 (38581) | 38581..39277 | + | 697 | WP_286347927.1 | IS1 family transposase | - |
| QUE55_RS01230 (39653) | 39653..40429 | + | 777 | WP_022631027.1 | MBL fold metallo-hydrolase | - |
| QUE55_RS01235 (40445) | 40445..41434 | + | 990 | WP_096261608.1 | HTH-type transcriptional regulator CdhR | VF |
| QUE55_RS01240 (41443) | 41443..41595 | + | 153 | WP_227443290.1 | hypothetical protein | - |
| QUE55_RS01245 (41646) | 41646..42342 | + | 697 | WP_286347927.1 | IS1 family transposase | - |
| QUE55_RS01250 (42427) | 42427..42721 | + | 295 | Protein_46 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QUE55_RS01255 (42766) | 42766..42961 | + | 196 | Protein_47 | serine/threonine protein kinase | - |
| QUE55_RS01260 (43082) | 43082..43822 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| QUE55_RS01265 (44101) | 44101..45078 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| QUE55_RS01270 (45722) | 45722..46133 | - | 412 | Protein_50 | DDE-type integrase/transposase/recombinase | - |
| QUE55_RS01275 (46135) | 46135..46422 | - | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QUE55_RS01280 (46419) | 46419..46670 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QUE55_RS01285 (46844) | 46844..47056 | - | 213 | WP_000402944.1 | hypothetical protein | - |
| QUE55_RS01290 (47431) | 47431..48636 | + | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| QUE55_RS01295 (48633) | 48633..49595 | + | 963 | WP_032200967.1 | ParB family protein | - |
| QUE55_RS01300 (49736) | 49736..49909 | - | 174 | Protein_56 | DUF4113 domain-containing protein | - |
| QUE55_RS01305 (49983) | 49983..50408 | + | 426 | WP_063090491.1 | antirestriction protein | - |
| QUE55_RS01310 (50408) | 50408..50861 | + | 454 | Protein_58 | hypothetical protein | - |
| QUE55_RS01315 (50858) | 50858..51049 | + | 192 | WP_032200969.1 | hypothetical protein | - |
| QUE55_RS01320 (52033) | 52033..52263 | + | 231 | WP_063116928.1 | hypothetical protein | - |
| QUE55_RS01325 (52315) | 52315..53676 | + | 1362 | WP_063116927.1 | DUF3560 domain-containing protein | - |
| QUE55_RS01330 (53723) | 53723..54286 | + | 564 | WP_032200974.1 | class I SAM-dependent methyltransferase | - |
| QUE55_RS01335 (54372) | 54372..54827 | - | 456 | WP_063116929.1 | hypothetical protein | - |
| QUE55_RS01340 (54829) | 54829..55116 | + | 288 | WP_063116926.1 | hypothetical protein | - |
| QUE55_RS01345 (55234) | 55234..56055 | + | 822 | WP_063116925.1 | DUF932 domain-containing protein | - |
| QUE55_RS01350 (56351) | 56351..56953 | - | 603 | WP_077756451.1 | hypothetical protein | VF |
| QUE55_RS01355 (57274) | 57274..57657 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QUE55_RS01360 (57844) | 57844..58533 | + | 690 | WP_000283384.1 | conjugal transfer transcriptional regulator TraJ | - |
| QUE55_RS01365 (58626) | 58626..59027 | + | 402 | WP_223201632.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| QUE55_RS01370 (59060) | 59060..59419 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| QUE55_RS01375 (59434) | 59434..59745 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QUE55_RS01380 (59767) | 59767..60333 | + | 567 | WP_000399797.1 | type IV conjugative transfer system protein TraE | - |
| QUE55_RS01385 (60320) | 60320..61048 | + | 729 | WP_001230766.1 | type-F conjugative transfer system secretin TraK | - |
| QUE55_RS01390 (61048) | 61048..62475 | + | 1428 | WP_061583829.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QUE55_RS01395 (62465) | 62465..63055 | + | 591 | WP_001523507.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QUE55_RS01400 (63042) | 63042..63239 | + | 198 | WP_001454499.1 | conjugal transfer protein TrbD | - |
| QUE55_RS01405 (63251) | 63251..63502 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| QUE55_RS01410 (63499) | 63499..64014 | + | 516 | WP_025269857.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QUE55_RS01415 (64149) | 64149..64370 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| QUE55_RS01420 (64530) | 64530..67157 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| QUE55_RS01425 (67154) | 67154..67540 | + | 387 | WP_000099689.1 | type-F conjugative transfer system protein TrbI | - |
| QUE55_RS01430 (67537) | 67537..68169 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| QUE55_RS01435 (68166) | 68166..69158 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| QUE55_RS01440 (69167) | 69167..69805 | + | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QUE55_RS01445 (69802) | 69802..71610 | + | 1809 | WP_032200982.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QUE55_RS01450 (71637) | 71637..71870 | + | 234 | Protein_86 | conjugal transfer protein TrbE | - |
| QUE55_RS01455 (71863) | 71863..72606 | + | 744 | WP_061583828.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QUE55_RS01460 (72622) | 72622..72969 | + | 348 | WP_001287902.1 | conjugal transfer protein TrbA | - |
| QUE55_RS01465 (73088) | 73088..73372 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QUE55_RS01470 (73359) | 73359..73904 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QUE55_RS01475 (73834) | 73834..74196 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| QUE55_RS01480 (74196) | 74196..75569 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| QUE55_RS01485 (75566) | 75566..78388 | + | 2823 | WP_032200986.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QUE55_RS01490 (78403) | 78403..78906 | + | 504 | WP_061583830.1 | surface exclusion protein | - |
| QUE55_RS01495 (78938) | 78938..79669 | + | 732 | WP_024192715.1 | conjugal transfer complement resistance protein TraT | - |
| QUE55_RS01500 (79922) | 79922..82075 | + | 2154 | WP_032279813.1 | type IV conjugative transfer system coupling protein TraD | - |
| QUE55_RS01505 (82075) | 82075..87345 | + | 5271 | WP_149506449.1 | Multifunctional conjugation protein TraI | Relaxase |
| QUE55_RS01510 (87365) | 87365..88111 | + | 747 | WP_001541899.1 | conjugal transfer pilus acetylase TraX | - |
| QUE55_RS01515 (88166) | 88166..88726 | + | 561 | WP_001541898.1 | fertility inhibition protein FinO | - |
| QUE55_RS01520 (88861) | 88861..89073 | + | 213 | WP_001541896.1 | ANR family transcriptional regulator | - |
| - (89415) | 89415..89476 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (89415) | 89415..89476 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (89415) | 89415..89476 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (89415) | 89415..89476 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| QUE55_RS01525 (89520) | 89520..89669 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| QUE55_RS01530 (89953) | 89953..90210 | + | 258 | WP_001541895.1 | replication regulatory protein RepA | - |
| QUE55_RS01535 (90442) | 90442..90516 | + | 75 | WP_061357229.1 | RepA leader peptide Tap | - |
| QUE55_RS01540 (90509) | 90509..91366 | + | 858 | WP_061583826.1 | incFII family plasmid replication initiator RepA | - |
| QUE55_RS01545 (92308) | 92308..92961 | + | 654 | WP_000616800.1 | type II CAAX endopeptidase family protein | - |
| QUE55_RS01550 (93054) | 93054..93311 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QUE55_RS01555 (93244) | 93244..93645 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QUE55_RS01560 (93930) | 93930..95702 | + | 1773 | WP_100038971.1 | DUF262 domain-containing protein | - |
| QUE55_RS01565 (96322) | 96322..96627 | + | 306 | WP_001152000.1 | hypothetical protein | - |
| QUE55_RS01570 (96638) | 96638..96782 | + | 145 | Protein_110 | hypothetical protein | - |
| QUE55_RS01575 (97060) | 97060..98064 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|