MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_AP027424 Location: 4226222..4235573 Organism: Escherichia coli strain B27 isolate B27 Replicon: chromosome
Accession: NZ_AP027424 Location: 4226222..4235573 Organism: Escherichia coli strain B27 isolate B27 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE78_RS20865 (4221383) | 4221383..4222684 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| QUE78_RS20870 (4222800) | 4222800..4223138 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| QUE78_RS20875 (4223114) | 4223114..4224811 | + | 1698 | WP_072662805.1 | protein-disulfide reductase DsbD | - |
| QUE78_RS20880 (4224848) | 4224848..4225423 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QUE78_RS20890 (4226222) | 4226222..4227760 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QUE78_RS20895 (4228126) | 4228126..4229460 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QUE78_RS20900 (4229540) | 4229540..4231687 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QUE78_RS20905 (4231746) | 4231746..4233203 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| QUE78_RS20910 (4233440) | 4233440..4234957 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QUE78_RS20915 (4235076) | 4235076..4235249 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QUE78_RS20920 (4235277) | 4235277..4235573 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QUE78_RS20925 (4235800) | 4235800..4236072 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| QUE78_RS20930 (4236084) | 4236084..4236314 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QUE78_RS20935 (4236495) | 4236495..4238126 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| QUE78_RS20940 (4238123) | 4238123..4238842 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.004 |