MGE detailed information
MGE type: Conjugative plasmid MGE length: 83405 bp
Accession: NZ_AP027420 Location: 1..83405 Organism: Escherichia coli strain EC261 isolate EC261 Replicon: plasmid pEC261_3
Accession: NZ_AP027420 Location: 1..83405 Organism: Escherichia coli strain EC261 isolate EC261 Replicon: plasmid pEC261_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE58_RS00010 () | 67..927 | + | 861 | WP_000704513.1 | putative protein YcjY | VF |
| QUE58_RS00015 () | 1030..1590 | + | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| QUE58_RS00020 () | 1726..1938 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| QUE58_RS00025 () | 2183..2257 | + | 75 | Protein_4 | endonuclease | - |
| - () | 2513..2574 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2513..2574 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2513..2574 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2513..2574 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| QUE58_RS00030 () | 2618..2767 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| QUE58_RS00035 () | 3051..3308 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| QUE58_RS00040 () | 3325..3576 | - | 252 | WP_223195197.1 | replication protein RepA | - |
| QUE58_RS00045 () | 3567..3614 | + | 48 | WP_229471593.1 | hypothetical protein | - |
| QUE58_RS00050 () | 3607..4089 | + | 483 | WP_001273588.1 | hypothetical protein | - |
| QUE58_RS00055 () | 4082..4547 | + | 466 | Protein_10 | plasmid replication initiator RepA | - |
| QUE58_RS00060 () | 4480..7485 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QUE58_RS00065 () | 7649..8206 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QUE58_RS00070 () | 8389..9249 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QUE58_RS00075 () | 9480..10316 | - | 837 | WP_001495812.1 | hypothetical protein | ARG |
| QUE58_RS00080 () | 10316..11119 | - | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QUE58_RS00085 () | 11182..11601 | - | 420 | Protein_16 | IS3 family transposase | - |
| QUE58_RS00090 () | 11662..12366 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QUE58_RS00095 () | 12419..12529 | - | 111 | Protein_18 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| QUE58_RS00100 () | 12655..13005 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| QUE58_RS00105 () | 13208..14221 | - | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| QUE58_RS00110 () | 14366..14863 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| QUE58_RS00115 () | 14975..15265 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| QUE58_RS00120 () | 15271..16109 | + | 839 | Protein_23 | Streptomycin 3''-adenylyltransferase | ARG |
| QUE58_RS00125 () | 16170..16874 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QUE58_RS00130 () | 17044..17325 | - | 282 | Protein_25 | transposase zinc-binding domain-containing protein | - |
| QUE58_RS00135 () | 17472..18332 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QUE58_RS00140 () | 18515..18853 | - | 339 | Protein_27 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QUE58_RS00145 () | 18917..19621 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QUE58_RS00150 () | 19743..20147 | - | 405 | WP_286347893.1 | antirestriction protein ArdAB regulator ArdR | - |
| QUE58_RS00155 () | 20205..20630 | - | 426 | WP_000447669.1 | antirestriction protein ArdB | - |
| QUE58_RS00160 () | 21043..21483 | + | 441 | WP_000861760.1 | translesion error-prone DNA polymerase V autoproteolytic subunit MucA | - |
| QUE58_RS00165 () | 21471..22736 | + | 1266 | WP_000457702.1 | translesion error-prone DNA polymerase V subunit MucB | - |
| QUE58_RS00170 () | 22887..23678 | + | 792 | WP_001452808.1 | SprT-like domain-containing protein | - |
| QUE58_RS00175 () | 23693..24034 | - | 342 | WP_000057569.1 | antirestriction protein ArdAB regulator ArdK | - |
| QUE58_RS00180 () | 24594..25313 | + | 720 | WP_000359513.1 | replication initiation protein | - |
| QUE58_RS00185 () | 27331..27924 | - | 594 | WP_142440252.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| QUE58_RS00190 () | 27930..28634 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QUE58_RS00195 () | 28700..29155 | + | 456 | Protein_38 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| QUE58_RS00200 () | 29158..32124 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| QUE58_RS00205 () | 32203..33207 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| QUE58_RS00210 () | 33484..33579 | + | 96 | Protein_41 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QUE58_RS00215 () | 33707..33910 | + | 204 | Protein_42 | hypothetical protein | - |
| QUE58_RS00220 () | 34111..34461 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| QUE58_RS00225 () | 34464..35426 | - | 963 | WP_000959874.1 | plasmid segregation protein ParM | - |
| QUE58_RS00230 () | 35573..35864 | + | 292 | Protein_45 | hypothetical protein | - |
| QUE58_RS00235 () | 35940..36623 | + | 684 | WP_073520024.1 | DNA methylase | - |
| QUE58_RS00240 () | 36624..36845 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QUE58_RS00245 () | 36775..37293 | + | 519 | WP_249409889.1 | DUF1380 family protein | - |
| QUE58_RS00250 () | 37338..38108 | + | 771 | WP_099357099.1 | hypothetical protein | - |
| QUE58_RS00255 () | 38524..38949 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| QUE58_RS00260 () | 38996..39418 | + | 423 | WP_000271681.1 | DUF1380 family protein | - |
| QUE58_RS00265 () | 39415..39606 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QUE58_RS00270 () | 39878..40126 | - | 249 | WP_072048988.1 | hypothetical protein | - |
| QUE58_RS00275 () | 40643..40873 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QUE58_RS00280 () | 40925..42286 | + | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| QUE58_RS00285 () | 42334..42897 | + | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| QUE58_RS00290 () | 42894..43112 | + | 219 | WP_071588970.1 | hypothetical protein | - |
| QUE58_RS00295 () | 43049..43282 | + | 234 | WP_071588969.1 | hypothetical protein | - |
| QUE58_RS00300 () | 43523..43729 | + | 207 | WP_073520019.1 | single-stranded DNA-binding protein | - |
| QUE58_RS00305 () | 43755..44294 | + | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| QUE58_RS00310 () | 44357..44590 | + | 234 | WP_087086828.1 | DUF905 family protein | - |
| QUE58_RS00315 () | 44656..46614 | + | 1959 | WP_099357091.1 | ParB/RepB/Spo0J family partition protein | - |
| QUE58_RS00320 () | 46669..47103 | + | 435 | WP_042634413.1 | conjugation system SOS inhibitor PsiB | - |
| QUE58_RS00325 () | 47100..47862 | + | 763 | Protein_64 | plasmid SOS inhibition protein A | - |
| QUE58_RS00330 () | 47831..48019 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 47831..48055 | + | 225 | NuclAT_0 | - | - |
| - () | 47831..48055 | + | 225 | NuclAT_0 | - | - |
| - () | 47831..48055 | + | 225 | NuclAT_0 | - | - |
| - () | 47831..48055 | + | 225 | NuclAT_0 | - | - |
| - | 47988..48053 | + | 66 | - | - | Antitoxin Detail |
| QUE58_RS00335 () | 48041..48190 | + | 150 | Protein_66 | plasmid maintenance protein Mok | - |
| QUE58_RS00340 () | 48132..48257 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QUE58_RS00345 () | 48704..48877 | - | 174 | Protein_68 | hypothetical protein | - |
| QUE58_RS00350 () | 48947..49153 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| QUE58_RS00355 () | 49178..49465 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| QUE58_RS00360 () | 49583..50404 | + | 822 | WP_286347894.1 | DUF932 domain-containing protein | - |
| QUE58_RS00365 () | 50701..51348 | - | 648 | WP_000614935.1 | hypothetical protein | VF |
| QUE58_RS00370 () | 51625..52008 | + | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QUE58_RS00375 () | 52198..52884 | + | 687 | WP_073520017.1 | PAS domain-containing protein | - |
| QUE58_RS00380 () | 52978..53205 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| QUE58_RS00385 () | 53239..53604 | + | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| QUE58_RS00390 () | 53619..53930 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QUE58_RS00395 () | 53952..54518 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| QUE58_RS00400 () | 54505..55233 | + | 729 | WP_029400178.1 | type-F conjugative transfer system secretin TraK | - |
| QUE58_RS00405 () | 55233..56660 | + | 1428 | WP_023352033.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QUE58_RS00410 () | 56650..57222 | + | 573 | WP_024179131.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QUE58_RS00415 () | 57219..57539 | + | 321 | WP_001462162.1 | conjugal transfer protein TrbD | - |
| QUE58_RS00420 () | 57532..57783 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| QUE58_RS00425 () | 57780..58295 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QUE58_RS00430 () | 58430..58651 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| QUE58_RS00435 () | 58811..61438 | + | 2628 | WP_063082140.1 | type IV secretion system protein TraC | - |
| QUE58_RS00440 () | 61435..61821 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| QUE58_RS00445 () | 61818..62450 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| QUE58_RS00450 () | 62447..63439 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| QUE58_RS00455 () | 63465..63926 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| QUE58_RS00460 () | 63956..64408 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| QUE58_RS00465 () | 64436..65074 | + | 639 | WP_001104086.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QUE58_RS00470 () | 65071..66879 | + | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QUE58_RS00475 () | 66906..67163 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| QUE58_RS00480 () | 67156..67899 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QUE58_RS00485 () | 67915..68262 | + | 348 | WP_072656932.1 | conjugal transfer protein TrbA | - |
| QUE58_RS00490 () | 68381..68665 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QUE58_RS00495 () | 68652..69197 | + | 546 | WP_000060037.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QUE58_RS00500 () | 69127..69489 | + | 363 | WP_073519999.1 | P-type conjugative transfer protein TrbJ | - |
| QUE58_RS00505 () | 69489..70862 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| QUE58_RS00510 () | 70859..73684 | + | 2826 | WP_001007030.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QUE58_RS00515 () | 73681..74190 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| QUE58_RS00520 () | 74204..74935 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| QUE58_RS00525 () | 75188..77377 | + | 2190 | WP_100007474.1 | type IV conjugative transfer system coupling protein TraD | - |
| QUE58_RS00530 () | 77377..82647 | + | 5271 | WP_286347891.1 | Multifunctional conjugation protein TraI | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|