MGE detailed information
MGE type: Conjugative plasmid MGE length: 98045 bp
Accession: NZ_AP027403 Location: 1..98045 Organism: Escherichia coli strain EC416 isolate EC416 Replicon: plasmid pEC416_1
Accession: NZ_AP027403 Location: 1..98045 Organism: Escherichia coli strain EC416 isolate EC416 Replicon: plasmid pEC416_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE37_RS00390 (1) | 1..858 | + | 858 | WP_032191900.1 | incFII family plasmid replication initiator RepA | - |
| QUE37_RS00395 (1561) | 1561..1719 | + | 159 | WP_032191902.1 | hypothetical protein | - |
| QUE37_RS00400 (1774) | 1774..2043 | + | 270 | WP_032191903.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QUE37_RS00405 (2043) | 2043..2321 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QUE37_RS00410 (3112) | 3112..3809 | + | 698 | WP_249824342.1 | IS1-like element IS1A family transposase | - |
| QUE37_RS00415 (4111) | 4111..4638 | + | 528 | WP_137531647.1 | YopT-type cysteine protease domain-containing protein | - |
| QUE37_RS00420 (4962) | 4962..5165 | + | 204 | WP_286347729.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| QUE37_RS00425 (5346) | 5346..5906 | - | 561 | Protein_7 | IS91 family transposase ISEc37 | Transposase |
| QUE37_RS00430 (6098) | 6098..7285 | - | 1188 | WP_000937612.1 | IS91 family transposase IS91 | Transposase |
| QUE37_RS00435 (7248) | 7248..7649 | - | 402 | WP_000124097.1 | hypothetical protein | - |
| QUE37_RS00440 (7731) | 7731..8210 | - | 480 | WP_032191917.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| QUE37_RS00445 (8562) | 8562..9158 | - | 597 | WP_032192956.1 | YfdX family protein | - |
| QUE37_RS00450 (9321) | 9321..10177 | - | 857 | Protein_12 | ISNCY family transposase ISLad2 | Transposase |
| QUE37_RS00455 (10231) | 10231..10656 | - | 426 | Protein_13 | IS200-IS605 family transposase IS609 | Transposase |
| QUE37_RS00460 (10664) | 10664..11758 | + | 1095 | Protein_14 | IS200-IS605 family transposase IS609 | Transposase |
| QUE37_RS00465 (11953) | 11953..12111 | + | 159 | Protein_15 | IS3 family transposase | - |
| QUE37_RS00470 (12644) | 12644..13120 | + | 477 | WP_032191908.1 | hypothetical protein | VF |
| QUE37_RS00475 (13123) | 13123..14601 | + | 1479 | WP_032192842.1 | hypothetical protein | VF |
| QUE37_RS00480 (14611) | 14611..15123 | + | 513 | WP_032191910.1 | hypothetical protein | - |
| QUE37_RS00485 (15133) | 15133..15555 | + | 423 | WP_032191911.1 | GPW/gp25 family protein | - |
| QUE37_RS00490 (15548) | 15548..17350 | + | 1803 | WP_089622449.1 | type VI secretion system baseplate subunit TssF | - |
| QUE37_RS00495 (17341) | 17341..18273 | + | 933 | WP_032192840.1 | type VI secretion system baseplate subunit TssG | - |
| QUE37_RS00500 (18286) | 18286..20268 | + | 1983 | WP_032192839.1 | type VI secretion system tip protein TssI/VgrG | - |
| QUE37_RS00505 (20279) | 20279..20746 | + | 468 | WP_032191923.1 | hypothetical protein | - |
| QUE37_RS00510 (20756) | 20756..21055 | + | 300 | WP_032191925.1 | PAAR domain-containing protein | - |
| QUE37_RS00515 (21059) | 21059..22138 | + | 1080 | WP_032191927.1 | hypothetical protein | VF |
| QUE37_RS00520 (22146) | 22146..22679 | + | 534 | WP_032191928.1 | type VI secretion lipoprotein TssJ | - |
| QUE37_RS00525 (22698) | 22698..24062 | + | 1365 | WP_032192838.1 | type VI secretion system baseplate subunit TssK | - |
| QUE37_RS00530 (24438) | 24438..24635 | + | 198 | Protein_28 | IS3 family transposase | - |
| QUE37_RS00535 (24776) | 24776..25366 | + | 591 | WP_244442368.1 | hypothetical protein | VF |
| QUE37_RS00540 (25632) | 25632..28766 | + | 3135 | WP_225856264.1 | type VI secretion protein IcmF/TssM N-terminal domain-containing protein | - |
| QUE37_RS00545 (28770) | 28770..31301 | + | 2532 | WP_032191932.1 | Protein ClpV1 | VF |
| QUE37_RS00550 (31797) | 31797..32927 | + | 1131 | WP_032191934.1 | VasL domain-containing protein | - |
| QUE37_RS00555 (33048) | 33048..33557 | + | 510 | WP_032191936.1 | hypothetical protein | - |
| QUE37_RS00560 (33811) | 33811..34368 | - | 558 | WP_050442480.1 | hypothetical protein | - |
| QUE37_RS00565 (35013) | 35013..36336 | + | 1324 | Protein_35 | ISNCY family transposase ISKpn21 | Transposase |
| QUE37_RS00570 (36655) | 36655..37056 | + | 402 | WP_000124097.1 | hypothetical protein | - |
| QUE37_RS00575 (37019) | 37019..38206 | + | 1188 | WP_000937612.1 | IS91 family transposase IS91 | Transposase |
| QUE37_RS00580 (38854) | 38854..39609 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QUE37_RS00585 (40197) | 40197..41363 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| QUE37_RS00590 (41363) | 41363..42334 | + | 972 | WP_000817035.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QUE37_RS00595 (43201) | 43201..44102 | + | 902 | Protein_41 | DUF1281 domain-containing protein | - |
| QUE37_RS00600 (44099) | 44099..44410 | + | 312 | WP_286347726.1 | hypothetical protein | - |
| QUE37_RS00605 (44487) | 44487..45170 | + | 684 | WP_032192316.1 | DNA methylase | - |
| QUE37_RS00610 (45171) | 45171..45392 | + | 222 | WP_001104870.1 | hypothetical protein | - |
| QUE37_RS00615 (45286) | 45286..45840 | + | 555 | WP_077248347.1 | DUF1380 family protein | - |
| QUE37_RS00620 (45886) | 45886..46662 | + | 777 | WP_001005035.1 | hypothetical protein | - |
| QUE37_RS00625 (46852) | 46852..47964 | - | 1113 | WP_286347727.1 | IS4 family transposase IS421 | Transposase |
| QUE37_RS00630 (48424) | 48424..48849 | + | 426 | WP_001198918.1 | antirestriction protein | - |
| QUE37_RS00635 (48896) | 48896..49318 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| QUE37_RS00640 (49315) | 49315..49506 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QUE37_RS00645 (49476) | 49476..50042 | - | 567 | WP_286347721.1 | hypothetical protein | - |
| QUE37_RS00650 (50070) | 50070..50276 | + | 207 | WP_050497023.1 | hypothetical protein | - |
| QUE37_RS00655 (50302) | 50302..50841 | + | 540 | WP_286347722.1 | single-stranded DNA-binding protein | - |
| QUE37_RS00660 (50898) | 50898..51131 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| QUE37_RS00665 (51190) | 51190..53148 | + | 1959 | WP_089622489.1 | ParB/RepB/Spo0J family partition protein | - |
| QUE37_RS00670 (53203) | 53203..53637 | + | 435 | WP_089622488.1 | conjugation system SOS inhibitor PsiB | - |
| QUE37_RS00675 (53634) | 53634..54396 | + | 763 | Protein_57 | plasmid SOS inhibition protein A | - |
| QUE37_RS00680 (54365) | 54365..54553 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (54522) | 54522..54587 | + | 66 | NuclAT_1 | - | Antitoxin Detail |
| - (54365) | 54365..54589 | + | 225 | NuclAT_0 | - | - |
| - (54365) | 54365..54589 | + | 225 | NuclAT_0 | - | - |
| - (54365) | 54365..54589 | + | 225 | NuclAT_0 | - | - |
| - (54365) | 54365..54589 | + | 225 | NuclAT_0 | - | - |
| - (54365) | 54365..54589 | - | 225 | NuclAT_0 | - | - |
| QUE37_RS00685 (54575) | 54575..54724 | + | 150 | Protein_59 | plasmid maintenance protein Mok | - |
| QUE37_RS00690 (54666) | 54666..54791 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QUE37_RS00695 (55011) | 55011..55244 | + | 234 | WP_286347723.1 | hypothetical protein | - |
| QUE37_RS00700 (55242) | 55242..55415 | - | 174 | Protein_62 | hypothetical protein | - |
| QUE37_RS00705 (55715) | 55715..56002 | + | 288 | WP_196042597.1 | hypothetical protein | - |
| QUE37_RS00710 (56121) | 56121..56942 | + | 822 | Protein_64 | DUF932 domain-containing protein | - |
| QUE37_RS00715 (57238) | 57238..57828 | - | 591 | WP_199902026.1 | hypothetical protein | VF |
| QUE37_RS00720 (58161) | 58161..58544 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QUE37_RS00725 (58731) | 58731..59420 | + | 690 | WP_000283384.1 | conjugal transfer transcriptional regulator TraJ | - |
| QUE37_RS00730 (59513) | 59513..59914 | + | 402 | WP_225856285.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| QUE37_RS00735 (59947) | 59947..60306 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| QUE37_RS00740 (60321) | 60321..60632 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QUE37_RS00745 (60654) | 60654..61220 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| QUE37_RS00750 (61207) | 61207..61935 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QUE37_RS00755 (61935) | 61935..63362 | + | 1428 | WP_000146636.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QUE37_RS00760 (63352) | 63352..63939 | + | 588 | WP_032191780.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QUE37_RS00765 (63926) | 63926..64243 | + | 318 | WP_024189706.1 | conjugal transfer protein TrbD | - |
| QUE37_RS00770 (64243) | 64243..64758 | + | 516 | WP_286347724.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QUE37_RS00775 (64893) | 64893..65114 | + | 222 | WP_099588274.1 | conjugal transfer protein TraR | - |
| QUE37_RS00780 (65274) | 65274..67901 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| QUE37_RS00785 (67898) | 67898..68284 | + | 387 | WP_001585100.1 | type-F conjugative transfer system protein TrbI | - |
| QUE37_RS00790 (68281) | 68281..68913 | + | 633 | WP_089622461.1 | type-F conjugative transfer system protein TraW | - |
| QUE37_RS00795 (68910) | 68910..69902 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| QUE37_RS00800 (69911) | 69911..70549 | + | 639 | WP_089622460.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QUE37_RS00805 (70546) | 70546..72354 | + | 1809 | WP_089622459.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QUE37_RS00810 (72381) | 72381..72638 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| QUE37_RS00815 (72631) | 72631..73374 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QUE37_RS00820 (73390) | 73390..73737 | + | 348 | WP_021534925.1 | conjugal transfer protein TrbA | - |
| QUE37_RS00825 (73856) | 73856..74140 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QUE37_RS00830 (74127) | 74127..74672 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QUE37_RS00835 (74602) | 74602..74964 | + | 363 | WP_011251381.1 | P-type conjugative transfer protein TrbJ | - |
| QUE37_RS00840 (74964) | 74964..76337 | + | 1374 | WP_107183377.1 | conjugal transfer pilus assembly protein TraH | - |
| QUE37_RS00845 (76334) | 76334..79159 | + | 2826 | WP_001554363.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QUE37_RS00850 (79156) | 79156..79665 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| QUE37_RS00855 (79679) | 79679..80410 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| QUE37_RS00860 (80662) | 80662..82860 | + | 2199 | WP_286347725.1 | type IV conjugative transfer system coupling protein TraD | - |
| QUE37_RS00865 (82860) | 82860..88130 | + | 5271 | WP_196042598.1 | Multifunctional conjugation protein TraI | Relaxase |
| QUE37_RS00870 (88150) | 88150..88896 | + | 747 | WP_032191889.1 | conjugal transfer pilus acetylase TraX | - |
| QUE37_RS00875 (88951) | 88951..89511 | + | 561 | WP_032191890.1 | fertility inhibition protein FinO | - |
| QUE37_RS00880 (89644) | 89644..89856 | + | 213 | WP_032191891.1 | ANR family transcriptional regulator | - |
| QUE37_RS00885 (89921) | 89921..90618 | + | 698 | WP_244443990.1 | IS1-like element IS1A family transposase | - |
| QUE37_RS00890 (90947) | 90947..91495 | + | 549 | WP_032191894.1 | fimbrial protein YehD | - |
| QUE37_RS00895 (91549) | 91549..92229 | + | 681 | WP_032191895.1 | putative fimbrial chaperone YehC | VF |
| QUE37_RS00900 (92244) | 92244..94730 | + | 2487 | WP_032191897.1 | Outer membrane usher protein YehB | VF |
| QUE37_RS00905 (94742) | 94742..95755 | + | 1014 | WP_032191899.1 | fimbrial protein | - |
| QUE37_RS00915 (96368) | 96368..96643 | - | 276 | WP_000179213.1 | IS1 family transposase IS1A | Transposase |
| QUE37_RS00920 (96707) | 96707..97246 | + | 540 | WP_286347728.1 | DUF2726 domain-containing protein | - |
| QUE37_RS00925 (97486) | 97486..97734 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| QUE37_RS00930 (97849) | 97849..98033 | + | 185 | Protein_107 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|