MGE detailed information
MGE type: Conjugative plasmid MGE length: 88936 bp
Accession: NZ_AP027158 Location: 1..88936 Organism: Escherichia coli strain JNE181771 Replicon: plasmid pJNE181771-2
Accession: NZ_AP027158 Location: 1..88936 Organism: Escherichia coli strain JNE181771 Replicon: plasmid pJNE181771-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUD66_RS24550 (1) | 1..1032 | + | 1032 | WP_000907875.1 | plasmid replication initiator RepA | - |
| QUD66_RS24555 (1941) | 1941..2210 | + | 270 | WP_000079940.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QUD66_RS24560 (2210) | 2210..2488 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QUD66_RS24565 (2688) | 2688..2954 | - | 267 | WP_000627828.1 | hypothetical protein | - |
| QUD66_RS24570 (2954) | 2954..3448 | - | 495 | WP_021561690.1 | hypothetical protein | - |
| QUD66_RS24575 (3504) | 3504..4106 | - | 603 | WP_000517686.1 | ProQ/FINO family protein | - |
| QUD66_RS24580 (4215) | 4215..4382 | + | 168 | Protein_6 | colicin-like pore-forming protein | - |
| QUD66_RS24585 (4413) | 4413..4748 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| QUD66_RS24590 (4877) | 4877..5224 | + | 348 | WP_000142456.1 | DUF6404 family protein | - |
| QUD66_RS24595 (5242) | 5242..5832 | - | 591 | WP_000198612.1 | hypothetical protein | - |
| QUD66_RS24600 (5832) | 5832..6089 | - | 258 | WP_000343101.1 | hypothetical protein | - |
| QUD66_RS24605 (6659) | 6659..7072 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| QUD66_RS24610 (7074) | 7074..7856 | + | 783 | WP_001164199.1 | site-specific integrase | - |
| QUD66_RS24615 (8029) | 8029..8382 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| QUD66_RS24620 (8432) | 8432..9247 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| QUD66_RS24625 (9490) | 9490..10017 | + | 528 | WP_000203268.1 | colicin B immunity protein | - |
| QUD66_RS24630 (10035) | 10035..11570 | - | 1536 | WP_001282376.1 | pore-forming bacteriocin colicin B | - |
| QUD66_RS24635 (12011) | 12011..12523 | + | 513 | WP_137495615.1 | hypothetical protein | - |
| QUD66_RS24640 (12674) | 12674..13024 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| QUD66_RS24645 (13027) | 13027..13989 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| QUD66_RS24650 (14191) | 14191..14502 | + | 312 | WP_032147121.1 | hypothetical protein | - |
| QUD66_RS24655 (14578) | 14578..14649 | + | 72 | Protein_21 | DNA methylase | - |
| QUD66_RS24660 (14731) | 14731..16431 | - | 1701 | WP_000125552.1 | group II intron reverse transcriptase/maturase | - |
| QUD66_RS24665 (17053) | 17053..17664 | + | 612 | Protein_23 | DNA methylase | - |
| QUD66_RS24670 (17665) | 17665..17886 | + | 222 | WP_021560304.1 | hypothetical protein | - |
| QUD66_RS24675 (17780) | 17780..18003 | + | 224 | Protein_25 | DUF1380 family protein | - |
| QUD66_RS24680 (18198) | 18198..19739 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| QUD66_RS24685 (19754) | 19754..20500 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| QUD66_RS24690 (20587) | 20587..20919 | + | 333 | Protein_28 | DUF1380 family protein | - |
| QUD66_RS24695 (20970) | 20970..21740 | + | 771 | WP_042957730.1 | hypothetical protein | - |
| QUD66_RS24700 (22156) | 22156..22581 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| QUD66_RS24705 (22628) | 22628..23050 | + | 423 | WP_009426926.1 | DUF1380 family protein | - |
| QUD66_RS24710 (23047) | 23047..23238 | + | 192 | WP_023278050.1 | hypothetical protein | - |
| QUD66_RS24715 (23309) | 23309..23623 | + | 315 | WP_024199621.1 | hypothetical protein | - |
| QUD66_RS24720 (24007) | 24007..24534 | + | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| QUD66_RS24725 (24592) | 24592..24825 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| QUD66_RS24730 (24884) | 24884..26842 | + | 1959 | WP_024225029.1 | ParB/RepB/Spo0J family partition protein | - |
| QUD66_RS24735 (26897) | 26897..27331 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QUD66_RS24740 (27328) | 27328..28047 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QUD66_RS24745 (28044) | 28044..28640 | + | 597 | WP_000978017.1 | hypothetical protein | - |
| QUD66_RS24750 (29103) | 29103..29603 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| QUD66_RS24755 (30332) | 30332..30766 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QUD66_RS24760 (30860) | 30860..31126 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QUD66_RS24765 (31191) | 31191..32132 | + | 942 | WP_000038340.1 | Recombination-promoting nuclease RpnA | VF |
| QUD66_RS24770 (32194) | 32194..32400 | + | 207 | WP_000150315.1 | hypothetical protein | VF |
| QUD66_RS24775 (32431) | 32431..32682 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QUD66_RS24780 (33261) | 33261..34109 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| QUD66_RS24785 (34195) | 34195..34530 | - | 336 | WP_244058877.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QUD66_RS24790 (34764) | 34764..35096 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QUD66_RS24795 (35107) | 35107..37806 | + | 2700 | WP_001303304.1 | Protein TraI | Relaxase |
| QUD66_RS24800 (37843) | 37843..40134 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| QUD66_RS24805 (40127) | 40127..41197 | - | 1071 | WP_000151580.1 | IncI1-type conjugal transfer protein TrbB | - |
| QUD66_RS24810 (41216) | 41216..42424 | - | 1209 | WP_001303305.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (42604) | 42604..42661 | - | 58 | NuclAT_0 | - | - |
| - (42604) | 42604..42661 | - | 58 | NuclAT_0 | - | - |
| - (42604) | 42604..42661 | - | 58 | NuclAT_0 | - | - |
| - (42604) | 42604..42661 | - | 58 | NuclAT_0 | - | - |
| QUD66_RS24815 (42716) | 42716..42868 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| QUD66_RS24820 (42940) | 42940..43191 | - | 252 | WP_001291967.1 | hypothetical protein | - |
| QUD66_RS24825 (43690) | 43690..43785 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QUD66_RS24830 (43850) | 43850..44026 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| QUD66_RS24835 (44369) | 44369..44578 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| QUD66_RS24840 (44650) | 44650..45312 | - | 663 | WP_000653333.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QUD66_RS24845 (45377) | 45377..47539 | - | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| QUD66_RS24850 (47636) | 47636..48220 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QUD66_RS24855 (48249) | 48249..49451 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| QUD66_RS24860 (49418) | 49418..50032 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| QUD66_RS24865 (50032) | 50032..53076 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| QUD66_RS24870 (53166) | 53166..53966 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QUD66_RS24875 (53950) | 53950..54138 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QUD66_RS24880 (54202) | 54202..54606 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| QUD66_RS24885 (54657) | 54657..55184 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QUD66_RS24890 (55184) | 55184..55888 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QUD66_RS24895 (55888) | 55888..57177 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| QUD66_RS24900 (57180) | 57180..58163 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| QUD66_RS24905 (58174) | 58174..58866 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| QUD66_RS24910 (58863) | 58863..59210 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QUD66_RS24915 (59228) | 59228..62995 | - | 3768 | WP_044707317.1 | DUF5710 domain-containing protein | - |
| QUD66_RS24920 (63085) | 63085..63636 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| QUD66_RS24925 (63651) | 63651..63941 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QUD66_RS24930 (63938) | 63938..65086 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QUD66_RS24935 (65083) | 65083..65901 | - | 819 | WP_244058876.1 | hypothetical protein | VF |
| QUD66_RS24940 (65898) | 65898..66356 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QUD66_RS24945 (66751) | 66751..67335 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QUD66_RS24950 (67395) | 67395..68597 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| QUD66_RS24955 (68682) | 68682..69506 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| QUD66_RS24960 (69657) | 69657..70811 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| QUD66_RS24965 (70810) | 70810..71094 | + | 285 | WP_187642572.1 | pilus assembly protein PilV | - |
| QUD66_RS24970 (72332) | 72332..72580 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| QUD66_RS24975 (72577) | 72577..73869 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| QUD66_RS24980 (73869) | 73869..74525 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| QUD66_RS24985 (74510) | 74510..75070 | - | 561 | WP_244058883.1 | hypothetical protein | VF |
| QUD66_RS24990 (75080) | 75080..75694 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| QUD66_RS24995 (75712) | 75712..76809 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QUD66_RS25000 (76822) | 76822..78375 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| QUD66_RS25005 (78386) | 78386..78838 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| QUD66_RS25010 (78825) | 78825..80120 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| QUD66_RS25015 (80113) | 80113..81795 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| QUD66_RS25020 (81809) | 81809..82246 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QUD66_RS25025 (82246) | 82246..83313 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| QUD66_RS25030 (83987) | 83987..84439 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| QUD66_RS25035 (84482) | 84482..84736 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| QUD66_RS25040 (85004) | 85004..85570 | - | 567 | WP_000776428.1 | protein TraD | - |
| QUD66_RS25045 (85584) | 85584..86267 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| QUD66_RS25050 (86521) | 86521..87054 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| QUD66_RS25055 (87496) | 87496..87783 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QUD66_RS25060 (87701) | 87701..87931 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|