MGE detailed information
MGE type: Genomic_island MGE length: 17178 bp
Accession: NZ_AP026961 Location: 3603318..3620495 Organism: Escherichia coli strain EC20-72C-1 Replicon: chromosome
Accession: NZ_AP026961 Location: 3603318..3620495 Organism: Escherichia coli strain EC20-72C-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO975_RS17550 (3598821) | 3598821..3599222 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3599940) | 3599940..3600020 | - | 81 | NuclAT_9 | - | - |
| - (3599940) | 3599940..3600020 | - | 81 | NuclAT_9 | - | - |
| - (3599940) | 3599940..3600020 | - | 81 | NuclAT_9 | - | - |
| - (3599940) | 3599940..3600020 | - | 81 | NuclAT_9 | - | - |
| OO975_RS17555 (3599280) | 3599280..3600524 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| OO975_RS17560 (3600616) | 3600616..3601074 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| OO975_RS17565 (3601335) | 3601335..3602792 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| OO975_RS17570 (3602849) | 3602849..3603370 | - | 522 | Protein_3439 | peptide chain release factor H | - |
| OO975_RS17575 (3603369) | 3603369..3603572 | - | 204 | Protein_3440 | RtcB family protein | - |
| OO975_RS17580 (3603817) | 3603817..3604269 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| OO975_RS17585 (3604279) | 3604279..3604677 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| OO975_RS17590 (3604680) | 3604680..3604973 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| OO975_RS17595 (3605025) | 3605025..3606080 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| OO975_RS17600 (3606151) | 3606151..3606936 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| OO975_RS17605 (3606908) | 3606908..3608620 | + | 1713 | Protein_3446 | hypothetical protein | VF |
| OO975_RS17610 (3608844) | 3608844..3609341 | - | 498 | WP_089615104.1 | REP-associated tyrosine transposase RayT | - |
| OO975_RS17615 (3609517) | 3609517..3610290 | - | 774 | WP_015675129.1 | hypothetical protein | VF |
| OO975_RS17620 (3610476) | 3610476..3610736 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| OO975_RS17625 (3610739) | 3610739..3611017 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| OO975_RS17630 (3611173) | 3611173..3611913 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| OO975_RS17635 (3611884) | 3611884..3612651 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| OO975_RS17640 (3612857) | 3612857..3613435 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| OO975_RS17645 (3613675) | 3613675..3616119 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| OO975_RS17650 (3616162) | 3616162..3616608 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| OO975_RS17655 (3616789) | 3616789..3617559 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| OO975_RS17660 (3617600) | 3617600..3618736 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| OO975_RS17665 (3619167) | 3619167..3619343 | - | 177 | WP_000008098.1 | hypothetical protein | - |
| OO975_RS17670 (3619340) | 3619340..3619558 | - | 219 | WP_001101841.1 | hypothetical protein | - |
| OO975_RS17675 (3619536) | 3619536..3620948 | - | 1413 | Protein_3460 | hypothetical protein | VF |
| OO975_RS17680 (3620946) | 3620946..3622274 | + | 1329 | Protein_3461 | type VI secretion system contractile sheath large subunit | - |
| OO975_RS17685 (3622281) | 3622281..3622694 | + | 414 | WP_000611742.1 | type VI secretion system baseplate subunit TssE | - |
| OO975_RS17690 (3622698) | 3622698..3624548 | + | 1851 | WP_000393832.1 | type VI secretion system baseplate subunit TssF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|