MGE detailed information
MGE type: Prophage MGE length: 106059 bp
Accession: NZ_AP026118 Location: 1992947..2099005 Organism: Escherichia coli strain CEC13004 Replicon: chromosome
Accession: NZ_AP026118 Location: 1992947..2099005 Organism: Escherichia coli strain CEC13004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO879_RS09655 (1989461) | 1989461..1990207 | + | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| OO879_RS09660 (1990296) | 1990296..1990982 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| OO879_RS09665 (1991159) | 1991159..1991362 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| OO879_RS09670 (1991398) | 1991398..1992858 | - | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| OO879_RS09675 (1992947) | 1992947..1994230 | - | 1284 | Protein_1900 | MHS family MFS transporter YdfJ | - |
| OO879_RS09680 (1994362) | 1994362..1994604 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| OO879_RS09685 (1994766) | 1994766..1995407 | - | 642 | WP_264832318.1 | hypothetical protein | VF |
| OO879_RS09690 (1995489) | 1995489..1996118 | - | 630 | WP_001356599.1 | hypothetical protein | VF |
| OO879_RS09695 (1996191) | 1996191..1996766 | - | 576 | WP_001131658.1 | hypothetical protein | VF |
| OO879_RS09700 (1996880) | 1996880..1997149 | - | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| OO879_RS09705 (1997151) | 1997151..1998464 | - | 1314 | WP_000268849.1 | ISNCY family transposase KIS | Transposase |
| OO879_RS09710 (1998529) | 1998529..1999128 | - | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| OO879_RS09715 (1999196) | 1999196..2001547 | - | 2352 | WP_136858502.1 | phage tail protein | - |
| OO879_RS09720 (2001763) | 2001763..2003273 | - | 1511 | Protein_1909 | host specificity protein J | - |
| OO879_RS09725 (2003616) | 2003616..2004197 | - | 582 | WP_001089999.1 | tail assembly protein | - |
| OO879_RS09730 (2004194) | 2004194..2004937 | - | 744 | WP_000194720.1 | C40 family peptidase | - |
| OO879_RS09735 (2004948) | 2004948..2005646 | - | 699 | WP_001303180.1 | phage minor tail protein L | - |
| OO879_RS09740 (2005646) | 2005646..2005987 | - | 342 | WP_000807954.1 | phage tail protein | - |
| OO879_RS09745 (2005980) | 2005980..2009222 | - | 3243 | WP_032339416.1 | phage tail tape measure protein | - |
| OO879_RS09750 (2009274) | 2009274..2009483 | - | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| OO879_RS09755 (2009579) | 2009579..2009953 | - | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| OO879_RS09760 (2009959) | 2009959..2010675 | - | 717 | WP_001275508.1 | major tail subunit | - |
| OO879_RS09765 (2010734) | 2010734..2011078 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| OO879_RS09770 (2011075) | 2011075..2011521 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| OO879_RS09775 (2011518) | 2011518..2011868 | - | 351 | WP_001007901.1 | phage head closure protein | - |
| OO879_RS09780 (2011878) | 2011878..2012204 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| OO879_RS09785 (2012201) | 2012201..2014299 | - | 2099 | Protein_1922 | phage portal protein | - |
| OO879_RS09790 (2014245) | 2014245..2014466 | - | 222 | WP_001063023.1 | hypothetical protein | - |
| OO879_RS09795 (2014511) | 2014511..2016448 | - | 1938 | WP_000173065.1 | phage major capsid protein | - |
| OO879_RS09800 (2016512) | 2016512..2018173 | - | 1662 | WP_001303179.1 | terminase large subunit | - |
| OO879_RS09805 (2018170) | 2018170..2018733 | - | 564 | WP_000958392.1 | terminase small subunit | - |
| OO879_RS09810 (2019023) | 2019023..2019388 | - | 366 | WP_015994246.1 | HNH endonuclease | - |
| OO879_RS09815 (2019430) | 2019430..2019657 | + | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| OO879_RS09820 (2020082) | 2020082..2020267 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| OO879_RS09825 (2020495) | 2020495..2020641 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| OO879_RS09830 (2020641) | 2020641..2021210 | - | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| OO879_RS09835 (2021481) | 2021481..2022014 | - | 534 | WP_000992148.1 | lysozyme | - |
| OO879_RS09840 (2022065) | 2022065..2022409 | - | 345 | WP_000731241.1 | YdfR family protein | - |
| OO879_RS09845 (2022414) | 2022414..2022629 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| OO879_RS09850 (2023068) | 2023068..2024918 | - | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| OO879_RS09855 (2024895) | 2024895..2025037 | + | 143 | Protein_1936 | hypothetical protein | - |
| OO879_RS09860 (2025232) | 2025232..2025399 | - | 168 | WP_000216636.1 | DUF3927 family protein | - |
| OO879_RS09865 (2025396) | 2025396..2025824 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| OO879_RS09880 (2026279) | 2026279..2026992 | - | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| OO879_RS09885 (2027128) | 2027128..2027325 | - | 198 | WP_000917763.1 | hypothetical protein | - |
| OO879_RS09890 (2027550) | 2027550..2028104 | - | 555 | WP_000640035.1 | DUF1133 family protein | - |
| OO879_RS09895 (2028167) | 2028167..2028472 | - | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OO879_RS09900 (2028485) | 2028485..2029534 | - | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| OO879_RS09905 (2029536) | 2029536..2029808 | - | 273 | WP_000191870.1 | hypothetical protein | - |
| OO879_RS09910 (2029930) | 2029930..2030274 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| OO879_RS09915 (2030394) | 2030394..2030549 | - | 156 | WP_000813258.1 | Hok/Gef family protein | Toxin Detail |
| OO879_RS09920 (2030840) | 2030840..2031397 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| OO879_RS09925 (2031399) | 2031399..2031617 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| OO879_RS09930 (2031745) | 2031745..2032056 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| OO879_RS09935 (2032049) | 2032049..2032276 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| OO879_RS09940 (2032273) | 2032273..2032554 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| OO879_RS09945 (2032587) | 2032587..2033303 | - | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| OO879_RS09950 (2033337) | 2033337..2033798 | - | 462 | WP_000139447.1 | replication protein P | - |
| OO879_RS09955 (2033791) | 2033791..2034834 | - | 1044 | WP_001262402.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| OO879_RS09960 (2034903) | 2034903..2035328 | - | 426 | WP_000693878.1 | toxin YdaT family protein | - |
| OO879_RS09965 (2035312) | 2035312..2035554 | - | 243 | WP_000747948.1 | Cro/CI family transcriptional regulator | - |
| OO879_RS09970 (2035946) | 2035946..2036284 | + | 339 | WP_001416688.1 | S24 family peptidase | - |
| OO879_RS09975 (2036577) | 2036577..2036729 | + | 153 | WP_000380316.1 | DUF1391 family protein | - |
| OO879_RS09980 (2036741) | 2036741..2037379 | + | 639 | WP_000394548.1 | hypothetical protein | - |
| OO879_RS09985 (2037380) | 2037380..2037589 | - | 210 | WP_001133037.1 | hypothetical protein | - |
| OO879_RS09990 (2038154) | 2038154..2038342 | + | 189 | WP_000449175.1 | cell division inhibition protein DicB | - |
| OO879_RS09995 (2038339) | 2038339..2038527 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| OO879_RS10000 (2038620) | 2038620..2039858 | + | 1239 | Protein_1963 | exonuclease | - |
| OO879_RS10005 (2039846) | 2039846..2040397 | + | 552 | Protein_1964 | Putative defective protein IntQ ; Integrase | Integrase |
| OO879_RS10010 (2040575) | 2040575..2040817 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| OO879_RS10015 (2040867) | 2040867..2041685 | - | 819 | Protein_1966 | IS256 family transposase IS1414 | Transposase |
| OO879_RS10020 (2041780) | 2041780..2042160 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| OO879_RS10025 (2042157) | 2042157..2042504 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| OO879_RS10030 (2042554) | 2042554..2044092 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| OO879_RS10035 (2044130) | 2044130..2044525 | - | 396 | Protein_1970 | IS256 family transposase ISEic2 | Transposase |
| OO879_RS10040 (2044675) | 2044675..2045325 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| OO879_RS10045 (2046036) | 2046036..2046611 | - | 576 | WP_001131642.1 | hypothetical protein | VF |
| OO879_RS10050 (2046725) | 2046725..2046994 | - | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| OO879_RS10055 (2046996) | 2046996..2048219 | - | 1224 | WP_127835414.1 | prophage tail fiber N-terminal domain-containing protein | - |
| OO879_RS10060 (2048284) | 2048284..2048883 | - | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| OO879_RS10065 (2048951) | 2048951..2052429 | - | 3479 | Protein_1976 | host specificity protein J | - |
| OO879_RS10070 (2052692) | 2052692..2053054 | - | 363 | Protein_1977 | phage minor tail protein L | - |
| OO879_RS10075 (2053054) | 2053054..2053395 | - | 342 | WP_000807954.1 | phage tail protein | - |
| OO879_RS10080 (2053388) | 2053388..2056630 | - | 3243 | WP_000212818.1 | phage tail tape measure protein | - |
| OO879_RS10085 (2056678) | 2056678..2056887 | - | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| OO879_RS10090 (2056983) | 2056983..2057357 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| OO879_RS10095 (2057372) | 2057372..2058088 | - | 717 | WP_062876526.1 | major tail subunit | - |
| OO879_RS10100 (2058154) | 2058154..2058498 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| OO879_RS10105 (2058495) | 2058495..2058941 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| OO879_RS10110 (2058938) | 2058938..2059288 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| OO879_RS10115 (2059298) | 2059298..2059624 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| OO879_RS10120 (2059627) | 2059627..2062206 | - | 2580 | WP_127835413.1 | phage portal protein | - |
| OO879_RS10125 (2062152) | 2062152..2062373 | - | 222 | WP_001063099.1 | hypothetical protein | - |
| OO879_RS10130 (2062418) | 2062418..2064355 | - | 1938 | WP_000173030.1 | phage major capsid protein | - |
| OO879_RS10135 (2064419) | 2064419..2066080 | - | 1662 | WP_001301491.1 | terminase large subunit | - |
| OO879_RS10140 (2066077) | 2066077..2066640 | - | 564 | WP_000958360.1 | terminase small subunit | - |
| OO879_RS10145 (2066933) | 2066933..2067298 | - | 366 | WP_000279796.1 | HNH endonuclease | - |
| OO879_RS10150 (2067340) | 2067340..2067567 | + | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| OO879_RS10155 (2067992) | 2067992..2068177 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| OO879_RS10160 (2068405) | 2068405..2068551 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| OO879_RS10165 (2068551) | 2068551..2069120 | - | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| OO879_RS10170 (2069391) | 2069391..2069924 | - | 534 | WP_000992137.1 | lysozyme | - |
| OO879_RS10175 (2069975) | 2069975..2070319 | - | 345 | WP_000731241.1 | YdfR family protein | - |
| OO879_RS10180 (2070324) | 2070324..2070539 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| OO879_RS10185 (2070979) | 2070979..2072829 | - | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| OO879_RS10190 (2072806) | 2072806..2072949 | + | 144 | Protein_2001 | hypothetical protein | - |
| OO879_RS10195 (2073144) | 2073144..2073311 | - | 168 | WP_000216653.1 | DUF3927 family protein | - |
| OO879_RS10200 (2073308) | 2073308..2073736 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| OO879_RS10220 (2074373) | 2074373..2075062 | - | 690 | WP_001059381.1 | bacteriophage antitermination protein Q | - |
| OO879_RS10225 (2075059) | 2075059..2075418 | - | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OO879_RS10230 (2075431) | 2075431..2076480 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| OO879_RS10235 (2076482) | 2076482..2076760 | - | 279 | WP_012779366.1 | hypothetical protein | - |
| OO879_RS10240 (2076928) | 2076928..2077083 | - | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| OO879_RS10245 (2077329) | 2077329..2077433 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| OO879_RS10250 (2077549) | 2077549..2078133 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| OO879_RS10255 (2078190) | 2078190..2078585 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| OO879_RS10260 (2078601) | 2078601..2079370 | - | 770 | Protein_2012 | DUF1627 domain-containing protein | - |
| OO879_RS10265 (2079396) | 2079396..2080136 | - | 741 | WP_000788939.1 | ATP-binding protein | - |
| OO879_RS10270 (2080143) | 2080143..2081105 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| OO879_RS10275 (2081128) | 2081128..2081553 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| OO879_RS10280 (2081550) | 2081550..2081783 | - | 234 | Protein_2016 | transcriptional regulator | - |
| OO879_RS10290 (2083094) | 2083094..2083165 | - | 72 | Protein_2018 | hypothetical protein | - |
| OO879_RS10295 (2083263) | 2083263..2083634 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| OO879_RS10300 (2083655) | 2083655..2083846 | + | 192 | WP_001302048.1 | hypothetical protein | - |
| OO879_RS10305 (2083848) | 2083848..2084126 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OO879_RS10310 (2084478) | 2084478..2084777 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| OO879_RS10315 (2084849) | 2084849..2085067 | + | 219 | WP_001171930.1 | protein YdfC | - |
| OO879_RS10320 (2085636) | 2085636..2085824 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| OO879_RS10325 (2085821) | 2085821..2086012 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| OO879_RS10330 (2086105) | 2086105..2088576 | + | 2472 | WP_000048458.1 | exonuclease | - |
| OO879_RS10335 (2088649) | 2088649..2088900 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| OO879_RS10340 (2088935) | 2088935..2089617 | + | 683 | Protein_2028 | DUF3596 domain-containing protein | - |
| OO879_RS10345 (2089597) | 2089597..2089683 | - | 87 | Protein_2029 | hypothetical protein | - |
| OO879_RS10350 (2089889) | 2089889..2090215 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| OO879_RS10355 (2090350) | 2090350..2090691 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| OO879_RS10360 (2090726) | 2090726..2091286 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| OO879_RS10365 (2091289) | 2091289..2091999 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| OO879_RS10370 (2092107) | 2092107..2092412 | + | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| OO879_RS10375 (2092611) | 2092611..2095037 | + | 2427 | WP_000041704.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OO879_RS10380 (2095098) | 2095098..2097521 | + | 2424 | WP_001414236.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OO879_RS10385 (2097532) | 2097532..2098149 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| OO879_RS10390 (2098151) | 2098151..2099005 | + | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| OO879_RS10395 (2099048) | 2099048..2099662 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| OO879_RS10400 (2099820) | 2099820..2101112 | + | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| OO879_RS10405 (2101065) | 2101065..2101760 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| OO879_RS10410 (2101885) | 2101885..2103105 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|