MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_AP026112 Location: 5190209..5199560 Organism: Escherichia coli strain CEC03102 Replicon: chromosome
Accession: NZ_AP026112 Location: 5190209..5199560 Organism: Escherichia coli strain CEC03102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO877_RS25955 (5186940) | 5186940..5187659 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| OO877_RS25960 (5187656) | 5187656..5189287 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| OO877_RS25965 (5189468) | 5189468..5189698 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| OO877_RS25970 (5189710) | 5189710..5189982 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| OO877_RS25975 (5190209) | 5190209..5190505 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| OO877_RS25980 (5190533) | 5190533..5190706 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| OO877_RS25985 (5190825) | 5190825..5192342 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| OO877_RS25990 (5192579) | 5192579..5194036 | - | 1458 | WP_000856824.1 | dipeptide/tripeptide permease DtpC | - |
| OO877_RS25995 (5194095) | 5194095..5196242 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| OO877_RS26000 (5196322) | 5196322..5197656 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| OO877_RS26005 (5198022) | 5198022..5199560 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| OO877_RS26015 (5200359) | 5200359..5200934 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| OO877_RS26020 (5200971) | 5200971..5202668 | - | 1698 | WP_000068986.1 | protein-disulfide reductase DsbD | - |
| OO877_RS26025 (5202644) | 5202644..5202982 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| OO877_RS26030 (5203098) | 5203098..5204366 | - | 1269 | WP_114297429.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |