MGE detailed information
MGE type: Prophage MGE length: 97035 bp
Accession: NZ_AP026110 Location: 1662216..1759250 Organism: Escherichia coli strain CEC08123 Replicon: chromosome
Accession: NZ_AP026110 Location: 1662216..1759250 Organism: Escherichia coli strain CEC08123 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO855_RS08085 (1658465) | 1658465..1660891 | - | 2427 | WP_000041704.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OO855_RS08090 (1661090) | 1661090..1661395 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| OO855_RS08095 (1661503) | 1661503..1662213 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| OO855_RS08100 (1662216) | 1662216..1662776 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| OO855_RS08105 (1662811) | 1662811..1663152 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| OO855_RS08110 (1663287) | 1663287..1663613 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| OO855_RS08115 (1663819) | 1663819..1663905 | + | 87 | Protein_1592 | hypothetical protein | - |
| OO855_RS08120 (1663885) | 1663885..1664567 | - | 683 | Protein_1593 | DUF3596 domain-containing protein | - |
| OO855_RS08125 (1664602) | 1664602..1664853 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| OO855_RS08130 (1664926) | 1664926..1667397 | - | 2472 | WP_000048458.1 | exonuclease | - |
| OO855_RS08135 (1667490) | 1667490..1667681 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| OO855_RS08140 (1667678) | 1667678..1667866 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| OO855_RS08145 (1668435) | 1668435..1668653 | - | 219 | WP_001171930.1 | protein YdfC | - |
| OO855_RS08150 (1668725) | 1668725..1669024 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| OO855_RS08155 (1669376) | 1669376..1669654 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OO855_RS08160 (1669656) | 1669656..1669847 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| OO855_RS08165 (1669868) | 1669868..1670239 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| OO855_RS08170 (1670337) | 1670337..1670639 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| OO855_RS08175 (1670636) | 1670636..1671061 | + | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| OO855_RS08180 (1671084) | 1671084..1672046 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| OO855_RS08185 (1672053) | 1672053..1672793 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| OO855_RS08190 (1672819) | 1672819..1673588 | + | 770 | Protein_1607 | DUF1627 domain-containing protein | - |
| OO855_RS08195 (1673604) | 1673604..1673999 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| OO855_RS08200 (1674056) | 1674056..1674640 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| OO855_RS08205 (1674756) | 1674756..1674860 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| OO855_RS08210 (1675106) | 1675106..1675261 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| OO855_RS08215 (1675429) | 1675429..1675707 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| OO855_RS08220 (1675709) | 1675709..1676758 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| OO855_RS08225 (1676771) | 1676771..1677130 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OO855_RS08230 (1677127) | 1677127..1677816 | + | 690 | WP_001059381.1 | bacteriophage antitermination protein Q | - |
| OO855_RS08250 (1678453) | 1678453..1678881 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| OO855_RS08255 (1678878) | 1678878..1679045 | + | 168 | WP_000216653.1 | DUF3927 family protein | - |
| OO855_RS08260 (1679240) | 1679240..1679383 | - | 144 | Protein_1618 | hypothetical protein | - |
| OO855_RS08265 (1679360) | 1679360..1681210 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| OO855_RS08270 (1681650) | 1681650..1681865 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| OO855_RS08275 (1681870) | 1681870..1682214 | + | 345 | WP_000731241.1 | YdfR family protein | - |
| OO855_RS08280 (1682265) | 1682265..1682798 | + | 534 | WP_000992137.1 | lysozyme | - |
| OO855_RS08285 (1683069) | 1683069..1683638 | + | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| OO855_RS08290 (1683638) | 1683638..1683784 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| OO855_RS08295 (1684012) | 1684012..1684197 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| OO855_RS08300 (1684622) | 1684622..1684849 | - | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| OO855_RS08305 (1684891) | 1684891..1685256 | + | 366 | WP_000279796.1 | HNH endonuclease | - |
| OO855_RS08310 (1685547) | 1685547..1686110 | + | 564 | WP_000958360.1 | terminase small subunit | - |
| OO855_RS08315 (1686107) | 1686107..1687768 | + | 1662 | WP_001303187.1 | terminase large subunit | - |
| OO855_RS08320 (1687832) | 1687832..1689769 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| OO855_RS08325 (1689814) | 1689814..1690035 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| OO855_RS08330 (1689981) | 1689981..1692565 | + | 2585 | Protein_1632 | phage portal protein | - |
| OO855_RS08335 (1692562) | 1692562..1692888 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| OO855_RS08340 (1692898) | 1692898..1693248 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| OO855_RS08345 (1693245) | 1693245..1693691 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| OO855_RS08350 (1693688) | 1693688..1694032 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| OO855_RS08355 (1694098) | 1694098..1694814 | + | 717 | WP_001275434.1 | major tail subunit | - |
| OO855_RS08360 (1694829) | 1694829..1695203 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| OO855_RS08365 (1695299) | 1695299..1695508 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| OO855_RS08370 (1695556) | 1695556..1698798 | + | 3243 | WP_000212818.1 | phage tail tape measure protein | - |
| OO855_RS08375 (1698791) | 1698791..1699132 | + | 342 | WP_000807954.1 | phage tail protein | - |
| OO855_RS08380 (1699132) | 1699132..1699494 | + | 363 | Protein_1642 | phage minor tail protein L | - |
| OO855_RS08385 (1699757) | 1699757..1703233 | + | 3477 | WP_000514789.1 | host specificity protein J | - |
| OO855_RS08390 (1703301) | 1703301..1703900 | + | 600 | WP_001230444.1 | hypothetical protein | VF |
| OO855_RS08395 (1703965) | 1703965..1705188 | + | 1224 | WP_264831507.1 | prophage tail fiber N-terminal domain-containing protein | - |
| OO855_RS08400 (1705190) | 1705190..1705459 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| OO855_RS08405 (1705573) | 1705573..1706148 | + | 576 | WP_001131642.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| OO855_RS08410 (1706859) | 1706859..1707509 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| OO855_RS08415 (1707659) | 1707659..1708054 | + | 396 | Protein_1649 | IS256 family transposase ISEic2 | Transposase |
| OO855_RS08420 (1708092) | 1708092..1709630 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| OO855_RS08425 (1709680) | 1709680..1710027 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| OO855_RS08430 (1710024) | 1710024..1710404 | - | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| OO855_RS08435 (1710499) | 1710499..1711317 | + | 819 | Protein_1653 | IS256 family transposase IS1414 | Transposase |
| OO855_RS08440 (1711367) | 1711367..1711609 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| OO855_RS08445 (1711787) | 1711787..1712338 | - | 552 | Protein_1655 | Dihydroxy-acid dehydratase ; Integrase | Integrase |
| OO855_RS08450 (1712326) | 1712326..1713564 | - | 1239 | Protein_1656 | exonuclease | - |
| OO855_RS08455 (1713657) | 1713657..1713845 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| OO855_RS08460 (1713842) | 1713842..1714030 | - | 189 | WP_000449175.1 | cell division inhibition protein DicB | - |
| OO855_RS08465 (1714595) | 1714595..1714804 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| OO855_RS08470 (1714805) | 1714805..1715443 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| OO855_RS08475 (1715455) | 1715455..1715607 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| OO855_RS08480 (1715900) | 1715900..1716238 | - | 339 | WP_001416688.1 | S24 family peptidase | - |
| OO855_RS08485 (1716630) | 1716630..1716873 | + | 244 | Protein_1663 | Cro/CI family transcriptional regulator | - |
| OO855_RS08490 (1716857) | 1716857..1717282 | + | 426 | WP_000693878.1 | toxin YdaT family protein | - |
| OO855_RS08495 (1717351) | 1717351..1718406 | + | 1056 | WP_001356791.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| OO855_RS08500 (1718399) | 1718399..1718860 | + | 462 | WP_000139447.1 | replication protein P | - |
| OO855_RS08505 (1718894) | 1718894..1719610 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| OO855_RS08510 (1719643) | 1719643..1719924 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| OO855_RS08515 (1719921) | 1719921..1720148 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| OO855_RS08520 (1720141) | 1720141..1720452 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| OO855_RS08525 (1720580) | 1720580..1720798 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| OO855_RS08530 (1720800) | 1720800..1721357 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| OO855_RS08535 (1721648) | 1721648..1721803 | + | 156 | WP_000813258.1 | Hok/Gef family protein | Toxin Detail |
| OO855_RS08540 (1721923) | 1721923..1722267 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| OO855_RS08545 (1722389) | 1722389..1722661 | + | 273 | WP_000191871.1 | hypothetical protein | - |
| OO855_RS08550 (1722663) | 1722663..1723712 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| OO855_RS08555 (1723725) | 1723725..1724030 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OO855_RS08560 (1724093) | 1724093..1724647 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| OO855_RS08565 (1724872) | 1724872..1725069 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| OO855_RS08570 (1725205) | 1725205..1725918 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| OO855_RS08585 (1726369) | 1726369..1726800 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| OO855_RS08590 (1726797) | 1726797..1726964 | + | 168 | WP_000216636.1 | DUF3927 family protein | - |
| OO855_RS08595 (1727159) | 1727159..1727301 | - | 143 | Protein_1683 | hypothetical protein | - |
| OO855_RS08600 (1727278) | 1727278..1729128 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| OO855_RS08605 (1729567) | 1729567..1729782 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| OO855_RS08610 (1729787) | 1729787..1730131 | + | 345 | WP_000731241.1 | YdfR family protein | - |
| OO855_RS08615 (1730182) | 1730182..1730715 | + | 534 | WP_000992148.1 | lysozyme | - |
| OO855_RS08620 (1730986) | 1730986..1731555 | + | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| OO855_RS08625 (1731555) | 1731555..1731701 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| OO855_RS08630 (1731929) | 1731929..1732114 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| OO855_RS08635 (1732539) | 1732539..1732766 | - | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| OO855_RS08640 (1732808) | 1732808..1733173 | + | 366 | WP_032173279.1 | HNH endonuclease | - |
| OO855_RS08645 (1733463) | 1733463..1734026 | + | 564 | WP_000958392.1 | terminase small subunit | - |
| OO855_RS08650 (1734023) | 1734023..1735684 | + | 1662 | WP_001303179.1 | terminase large subunit | - |
| OO855_RS08655 (1735748) | 1735748..1737685 | + | 1938 | WP_000173065.1 | phage major capsid protein | - |
| OO855_RS08660 (1737730) | 1737730..1737951 | + | 222 | WP_001063023.1 | hypothetical protein | - |
| OO855_RS08665 (1737897) | 1737897..1739995 | + | 2099 | Protein_1697 | phage portal protein | - |
| OO855_RS08670 (1739992) | 1739992..1740318 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| OO855_RS08675 (1740328) | 1740328..1740678 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| OO855_RS08680 (1740675) | 1740675..1741121 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| OO855_RS08685 (1741118) | 1741118..1741462 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| OO855_RS08690 (1741521) | 1741521..1742237 | + | 717 | WP_001275508.1 | major tail subunit | - |
| OO855_RS08695 (1742243) | 1742243..1742617 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| OO855_RS08700 (1742713) | 1742713..1742922 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| OO855_RS08705 (1742974) | 1742974..1746216 | + | 3243 | WP_000212925.1 | phage tail tape measure protein | - |
| OO855_RS08710 (1746209) | 1746209..1746550 | + | 342 | WP_000807954.1 | phage tail protein | - |
| OO855_RS08715 (1746550) | 1746550..1747248 | + | 699 | WP_001179510.1 | phage minor tail protein L | - |
| OO855_RS08720 (1747259) | 1747259..1748002 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| OO855_RS08725 (1747999) | 1747999..1748580 | + | 582 | WP_001089999.1 | tail assembly protein | - |
| OO855_RS08730 (1748923) | 1748923..1750434 | + | 1512 | Protein_1710 | host specificity protein J | - |
| OO855_RS08735 (1750434) | 1750434..1753001 | + | 2568 | Protein_1711 | host specificity protein J | - |
| OO855_RS08740 (1753069) | 1753069..1753668 | + | 600 | WP_001230508.1 | Aspartate 1-decarboxylase | VF |
| OO855_RS08745 (1753733) | 1753733..1755046 | + | 1314 | WP_000268849.1 | ISNCY family transposase KIS | Transposase |
| OO855_RS08750 (1755048) | 1755048..1755317 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| OO855_RS08755 (1755431) | 1755431..1756006 | + | 576 | WP_001131658.1 | Bifunctional ligase/repressor BirA | VF |
| OO855_RS08760 (1756079) | 1756079..1756708 | + | 630 | WP_001356599.1 | CCA-adding enzyme | VF |
| OO855_RS08765 (1756790) | 1756790..1757431 | + | 642 | WP_001143804.1 | D-inositol-3-phosphate glycosyltransferase | VF |
| OO855_RS08770 (1757593) | 1757593..1757835 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| OO855_RS08775 (1757967) | 1757967..1759250 | + | 1284 | Protein_1719 | MHS family MFS transporter YdfJ | - |
| OO855_RS08780 (1759339) | 1759339..1760799 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| OO855_RS08785 (1760835) | 1760835..1761038 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| OO855_RS08790 (1761215) | 1761215..1761901 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| OO855_RS08795 (1761990) | 1761990..1762736 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|