MGE detailed information
MGE type: Conjugative plasmid MGE length: 66944 bp
Accession: NZ_AP026094 Location: 1..66944 Organism: Escherichia coli strain 27_141091 Replicon: plasmid pNIID27_2
Accession: NZ_AP026094 Location: 1..66944 Organism: Escherichia coli strain 27_141091 Replicon: plasmid pNIID27_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO959_RS27390 (1) | 1..75 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| OO959_RS27395 (68) | 68..925 | + | 858 | WP_001554370.1 | incFII family plasmid replication initiator RepA | - |
| OO959_RS27400 (1625) | 1625..1783 | + | 159 | WP_192795837.1 | hypothetical protein | - |
| OO959_RS27405 (1838) | 1838..2107 | + | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| OO959_RS27410 (2107) | 2107..2385 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| OO959_RS27415 (2470) | 2470..2817 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| OO959_RS27420 (2835) | 2835..3425 | - | 591 | WP_042004720.1 | hypothetical protein | - |
| OO959_RS27425 (3422) | 3422..3682 | - | 261 | WP_019842588.1 | hypothetical protein | - |
| OO959_RS27430 (4251) | 4251..4664 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| OO959_RS27435 (4666) | 4666..5448 | + | 783 | WP_001164199.1 | site-specific integrase | - |
| OO959_RS27440 (5621) | 5621..5974 | + | 354 | WP_001401712.1 | colicin M immunity protein | - |
| OO959_RS27445 (6024) | 6024..6839 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| OO959_RS27450 (7082) | 7082..7609 | + | 528 | WP_001480711.1 | colicin B immunity protein | - |
| OO959_RS27455 (7627) | 7627..9162 | - | 1536 | WP_001282376.1 | pore-forming bacteriocin colicin B | - |
| OO959_RS27460 (9603) | 9603..10115 | + | 513 | WP_151553468.1 | hypothetical protein | - |
| OO959_RS27465 (10266) | 10266..10616 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| OO959_RS27470 (10619) | 10619..11581 | - | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| OO959_RS27475 (11761) | 11761..12036 | + | 276 | WP_264832300.1 | hypothetical protein | - |
| OO959_RS27480 (12113) | 12113..12796 | + | 684 | WP_000085890.1 | DNA methylase | - |
| OO959_RS27485 (12797) | 12797..13018 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| OO959_RS27490 (12999) | 12999..13466 | + | 468 | WP_238868746.1 | DUF1380 family protein | - |
| OO959_RS27495 (13517) | 13517..14293 | + | 777 | WP_001483071.1 | hypothetical protein | - |
| OO959_RS27500 (14709) | 14709..15134 | + | 426 | WP_001482475.1 | antirestriction protein | - |
| OO959_RS27505 (15181) | 15181..15603 | + | 423 | WP_097701254.1 | DUF1380 family protein | - |
| OO959_RS27510 (15600) | 15600..15791 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| OO959_RS27515 (16067) | 16067..16315 | - | 249 | WP_071535686.1 | hypothetical protein | - |
| OO959_RS27520 (16832) | 16832..17062 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| OO959_RS27525 (17114) | 17114..18475 | + | 1362 | WP_000170728.1 | DUF3560 domain-containing protein | - |
| OO959_RS27530 (18522) | 18522..19085 | + | 564 | WP_063501602.1 | class I SAM-dependent methyltransferase | - |
| OO959_RS27535 (19082) | 19082..19300 | + | 219 | WP_071588970.1 | hypothetical protein | - |
| OO959_RS27540 (19237) | 19237..19470 | + | 234 | WP_071588969.1 | hypothetical protein | - |
| OO959_RS27545 (19711) | 19711..19917 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| OO959_RS27550 (19943) | 19943..20482 | + | 540 | WP_009426937.1 | single-stranded DNA-binding protein | - |
| OO959_RS27555 (20544) | 20544..20777 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| OO959_RS27560 (20842) | 20842..22800 | + | 1959 | WP_001530506.1 | ParB/RepB/Spo0J family partition protein | - |
| OO959_RS27565 (22855) | 22855..23289 | + | 435 | WP_000845923.1 | conjugation system SOS inhibitor PsiB | - |
| OO959_RS27570 (23286) | 23286..24048 | + | 763 | Protein_36 | plasmid SOS inhibition protein A | - |
| OO959_RS27575 (24017) | 24017..24205 | - | 189 | WP_001336239.1 | hypothetical protein | - |
| - (24174) | 24174..24239 | + | 66 | NuclAT_1 | - | Antitoxin Detail |
| - (24017) | 24017..24241 | + | 225 | NuclAT_0 | - | - |
| - (24017) | 24017..24241 | + | 225 | NuclAT_0 | - | - |
| - (24017) | 24017..24241 | + | 225 | NuclAT_0 | - | - |
| - (24017) | 24017..24241 | + | 225 | NuclAT_0 | - | - |
| - (24017) | 24017..24241 | - | 225 | NuclAT_0 | - | - |
| OO959_RS27580 (24227) | 24227..24376 | + | 150 | Protein_38 | plasmid maintenance protein Mok | - |
| OO959_RS27585 (24318) | 24318..24443 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| OO959_RS27590 (24663) | 24663..24893 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| OO959_RS27595 (24891) | 24891..25063 | - | 173 | Protein_41 | hypothetical protein | - |
| OO959_RS27600 (25133) | 25133..25339 | + | 207 | WP_050437515.1 | hypothetical protein | - |
| OO959_RS27605 (25364) | 25364..25651 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| OO959_RS27610 (25771) | 25771..26592 | + | 822 | WP_264832301.1 | DUF932 domain-containing protein | - |
| OO959_RS27615 (26889) | 26889..27479 | - | 591 | WP_165850686.1 | hypothetical protein | VF |
| OO959_RS27620 (27812) | 27812..28195 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| OO959_RS27625 (28382) | 28382..29071 | + | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| OO959_RS27630 (29164) | 29164..29565 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| OO959_RS27635 (29598) | 29598..29957 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| OO959_RS27640 (29972) | 29972..30283 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| OO959_RS27645 (30305) | 30305..30871 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| OO959_RS27650 (30858) | 30858..31586 | + | 729 | WP_032301290.1 | type-F conjugative transfer system secretin TraK | - |
| OO959_RS27655 (31586) | 31586..33013 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| OO959_RS27660 (33003) | 33003..33575 | + | 573 | WP_000002794.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| OO959_RS27665 (33572) | 33572..33889 | + | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| OO959_RS27670 (33886) | 33886..34137 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| OO959_RS27675 (34134) | 34134..34649 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| OO959_RS27680 (34783) | 34783..35004 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| OO959_RS27685 (35164) | 35164..37791 | + | 2628 | WP_001064248.1 | type IV secretion system protein TraC | - |
| OO959_RS27690 (37788) | 37788..38174 | + | 387 | WP_096975891.1 | type-F conjugative transfer system protein TrbI | - |
| OO959_RS27695 (38171) | 38171..38803 | + | 633 | WP_063113346.1 | type-F conjugative transfer system protein TraW | - |
| OO959_RS27700 (38800) | 38800..39792 | + | 993 | WP_151553453.1 | conjugal transfer pilus assembly protein TraU | - |
| OO959_RS27705 (40195) | 40195..40716 | + | 522 | WP_264832296.1 | hypothetical protein | - |
| OO959_RS27710 (40743) | 40743..41381 | + | 639 | WP_151553458.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| OO959_RS27715 (41378) | 41378..43228 | + | 1851 | WP_151553460.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| OO959_RS27720 (43255) | 43255..43512 | + | 258 | WP_151553470.1 | conjugal transfer protein TrbE | - |
| OO959_RS27725 (43505) | 43505..44248 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| OO959_RS27730 (44264) | 44264..44611 | + | 348 | WP_001287895.1 | conjugal transfer protein TrbA | - |
| OO959_RS27735 (44730) | 44730..45014 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| OO959_RS27740 (45001) | 45001..45546 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| OO959_RS27745 (45476) | 45476..45838 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| OO959_RS27750 (45838) | 45838..47211 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| OO959_RS27755 (47208) | 47208..50033 | + | 2826 | WP_001554363.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| OO959_RS27760 (50030) | 50030..50539 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| OO959_RS27765 (50553) | 50553..51284 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| OO959_RS27770 (51536) | 51536..53815 | + | 2280 | WP_264832297.1 | Coupling protein TraD | VF |
| OO959_RS27775 (53815) | 53815..59085 | + | 5271 | WP_264832298.1 | Multifunctional conjugation protein TraI | Relaxase |
| OO959_RS27780 (59105) | 59105..59851 | + | 747 | WP_042111910.1 | conjugal transfer pilus acetylase TraX | - |
| OO959_RS27785 (59905) | 59905..60465 | + | 561 | WP_001554368.1 | fertility inhibition protein FinO | - |
| OO959_RS27790 (60598) | 60598..60810 | + | 213 | WP_005012601.1 | hypothetical protein | - |
| OO959_RS27795 (61055) | 61055..61516 | + | 462 | WP_001233848.1 | thermonuclease family protein | - |
| OO959_RS27800 (61562) | 61562..61771 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| OO959_RS27805 (61841) | 61841..64825 | - | 2985 | WP_032275676.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| OO959_RS27810 (64986) | 64986..65576 | + | 591 | WP_264832299.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| OO959_RS27815 (65630) | 65630..66220 | + | 591 | WP_151553466.1 | DUF2726 domain-containing protein | - |
| OO959_RS27820 (66460) | 66460..66720 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|