MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_AP026087 Location: 5187435..5196786 Organism: Escherichia coli strain 8_140198 Replicon: chromosome
Accession: NZ_AP026087 Location: 5187435..5196786 Organism: Escherichia coli strain 8_140198 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO841_RS26100 (5184166) | 5184166..5184885 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| OO841_RS26105 (5184882) | 5184882..5186513 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| OO841_RS26110 (5186694) | 5186694..5186924 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| OO841_RS26115 (5186936) | 5186936..5187208 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| OO841_RS26120 (5187435) | 5187435..5187731 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| OO841_RS26125 (5187759) | 5187759..5187932 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| OO841_RS26130 (5188051) | 5188051..5189568 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| OO841_RS26135 (5189805) | 5189805..5191262 | - | 1458 | WP_000856824.1 | dipeptide/tripeptide permease DtpC | - |
| OO841_RS26140 (5191321) | 5191321..5193468 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| OO841_RS26145 (5193548) | 5193548..5194882 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| OO841_RS26150 (5195248) | 5195248..5196786 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| OO841_RS26160 (5197585) | 5197585..5198160 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| OO841_RS26165 (5198197) | 5198197..5199894 | - | 1698 | WP_000068986.1 | protein-disulfide reductase DsbD | - |
| OO841_RS26170 (5199870) | 5199870..5200208 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| OO841_RS26175 (5200324) | 5200324..5201625 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |