MGE detailed information
MGE type: Conjugative plasmid MGE length: 91132 bp
Accession: NZ_AP025753 Location: 1..91132 Organism: Escherichia sp. HH154_1D strain HH-P049 Replicon: plasmid pla2
Accession: NZ_AP025753 Location: 1..91132 Organism: Escherichia sp. HH154_1D strain HH-P049 Replicon: plasmid pla2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE53_RS27545 (46) | 46..1077 | + | 1032 | WP_000907868.1 | plasmid replication initiator RepA | - |
| QUE53_RS27550 (1775) | 1775..1933 | + | 159 | WP_000829588.1 | hypothetical protein | - |
| QUE53_RS27555 (1988) | 1988..2257 | + | 270 | WP_000079932.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QUE53_RS27560 (2257) | 2257..2535 | + | 279 | WP_013009346.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QUE53_RS27565 (2731) | 2731..3027 | - | 297 | WP_001419651.1 | hypothetical protein | - |
| QUE53_RS27570 (3372) | 3372..3959 | + | 588 | WP_286347576.1 | serine acetyltransferase | - |
| QUE53_RS27575 (4241) | 4241..4834 | - | 594 | WP_001401779.1 | ProQ/FINO family protein | - |
| QUE53_RS27580 (5188) | 5188..6534 | + | 1347 | WP_001132032.1 | protein YagA | - |
| QUE53_RS27585 (6813) | 6813..8693 | + | 1881 | WP_001474701.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QUE53_RS27590 (8715) | 8715..8924 | - | 210 | WP_071590427.1 | colicin E1 family microcin immunity protein | - |
| QUE53_RS27595 (9178) | 9178..9525 | + | 348 | WP_000142441.1 | DUF6404 family protein | - |
| QUE53_RS27600 (9543) | 9543..10133 | - | 591 | WP_000194574.1 | hypothetical protein | - |
| QUE53_RS27605 (10133) | 10133..10390 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| QUE53_RS27610 (10960) | 10960..11274 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| QUE53_RS27615 (11336) | 11336..12106 | + | 771 | WP_223349459.1 | hypothetical protein | - |
| QUE53_RS27620 (12151) | 12151..12936 | + | 786 | WP_077249540.1 | site-specific integrase | - |
| QUE53_RS27625 (13074) | 13074..13349 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| QUE53_RS27630 (13343) | 13343..13987 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| QUE53_RS27635 (14216) | 14216..15187 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| QUE53_RS27640 (15192) | 15192..15584 | + | 393 | WP_000340830.1 | plasmid partitioning/stability family protein | - |
| QUE53_RS27645 (15589) | 15589..16860 | - | 1272 | WP_286347573.1 | Y-family DNA polymerase | - |
| QUE53_RS27650 (16860) | 16860..17297 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QUE53_RS27655 (17294) | 17294..17542 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QUE53_RS27660 (17960) | 17960..18862 | + | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| QUE53_RS27665 (18859) | 18859..19170 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| QUE53_RS27670 (19246) | 19246..19929 | + | 684 | WP_000086148.1 | DNA methylase | - |
| QUE53_RS27675 (19930) | 19930..20151 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| QUE53_RS27680 (20132) | 20132..20598 | + | 467 | Protein_27 | DUF1380 family protein | - |
| QUE53_RS27685 (20649) | 20649..21419 | + | 771 | WP_286347574.1 | hypothetical protein | - |
| QUE53_RS27690 (21837) | 21837..22262 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| QUE53_RS27695 (22309) | 22309..22731 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QUE53_RS27700 (22728) | 22728..22919 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QUE53_RS27705 (22990) | 22990..23304 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| QUE53_RS27710 (23688) | 23688..23981 | + | 294 | Protein_33 | single-stranded DNA-binding protein | - |
| QUE53_RS27715 (24049) | 24049..24831 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| QUE53_RS27720 (24828) | 24828..25850 | - | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| QUE53_RS27725 (25935) | 25935..26174 | + | 240 | Protein_36 | single-stranded DNA-binding protein | - |
| QUE53_RS27730 (26232) | 26232..26465 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| QUE53_RS27735 (26524) | 26524..28482 | + | 1959 | WP_286347575.1 | ParB/RepB/Spo0J family partition protein | - |
| QUE53_RS27740 (28537) | 28537..28971 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QUE53_RS27745 (28968) | 28968..29687 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QUE53_RS27750 (29684) | 29684..30280 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| QUE53_RS27755 (30743) | 30743..31243 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| QUE53_RS27760 (31972) | 31972..32406 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| QUE53_RS27765 (32500) | 32500..32766 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QUE53_RS27770 (32831) | 32831..33709 | + | 879 | WP_000038331.1 | Recombination-promoting nuclease RpnA | VF |
| QUE53_RS27775 (33771) | 33771..33977 | + | 207 | WP_001532090.1 | hypothetical protein | VF |
| QUE53_RS27780 (34008) | 34008..34259 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| QUE53_RS27785 (34368) | 34368..34595 | - | 228 | WP_103900442.1 | hypothetical protein | - |
| QUE53_RS27790 (34839) | 34839..35687 | + | 849 | WP_103900443.1 | DUF4942 domain-containing protein | - |
| QUE53_RS27795 (35773) | 35773..36108 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QUE53_RS27800 (36342) | 36342..36674 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QUE53_RS27805 (36685) | 36685..39384 | + | 2700 | WP_001350015.1 | Protein TraI | Relaxase |
| QUE53_RS27810 (39421) | 39421..41712 | - | 2292 | WP_072119433.1 | F-type conjugative transfer protein TrbC | - |
| QUE53_RS27815 (41705) | 41705..42775 | - | 1071 | WP_000151580.1 | IncI1-type conjugal transfer protein TrbB | - |
| QUE53_RS27820 (42794) | 42794..44002 | - | 1209 | WP_001303305.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (44182) | 44182..44239 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (44182) | 44182..44239 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (44182) | 44182..44239 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (44182) | 44182..44239 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| QUE53_RS27825 (44294) | 44294..44446 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| QUE53_RS27830 (44518) | 44518..44769 | - | 252 | WP_001291967.1 | hypothetical protein | - |
| QUE53_RS27835 (45268) | 45268..45363 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QUE53_RS27840 (45428) | 45428..45604 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| QUE53_RS27845 (45936) | 45936..46145 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| QUE53_RS27850 (46217) | 46217..46879 | - | 663 | WP_000653333.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QUE53_RS27855 (46944) | 46944..49106 | - | 2163 | WP_032220734.1 | DotA/TraY family protein | - |
| QUE53_RS27860 (49203) | 49203..49787 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QUE53_RS27865 (49816) | 49816..51018 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| QUE53_RS27870 (50985) | 50985..51599 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| QUE53_RS27875 (51599) | 51599..54643 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| QUE53_RS27880 (54733) | 54733..55533 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QUE53_RS27885 (55517) | 55517..55705 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QUE53_RS27890 (55769) | 55769..56173 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| QUE53_RS27895 (56224) | 56224..56751 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QUE53_RS27900 (56751) | 56751..57461 | - | 711 | WP_286347571.1 | IncI1-type conjugal transfer protein TraP | - |
| QUE53_RS27905 (57461) | 57461..58750 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| QUE53_RS27910 (58753) | 58753..59736 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| QUE53_RS27915 (59747) | 59747..60439 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| QUE53_RS27920 (60436) | 60436..60783 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QUE53_RS27925 (60801) | 60801..64568 | - | 3768 | WP_103900478.1 | DUF5710 domain-containing protein | - |
| QUE53_RS27930 (64659) | 64659..65210 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| QUE53_RS27935 (65225) | 65225..65515 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| QUE53_RS27940 (65512) | 65512..66660 | - | 1149 | WP_001024971.1 | putative protein YggR | VF |
| QUE53_RS27945 (66657) | 66657..67475 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| QUE53_RS27950 (67472) | 67472..67930 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QUE53_RS27955 (68324) | 68324..68908 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QUE53_RS27960 (68968) | 68968..70170 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QUE53_RS27965 (70255) | 70255..71079 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| QUE53_RS27970 (71230) | 71230..72384 | - | 1155 | WP_074516522.1 | site-specific integrase | - |
| QUE53_RS27975 (72383) | 72383..72700 | + | 318 | WP_001558195.1 | hypothetical protein | - |
| QUE53_RS27980 (73372) | 73372..73620 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| QUE53_RS27985 (73617) | 73617..74909 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| QUE53_RS27990 (74909) | 74909..75565 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| QUE53_RS27995 (75550) | 75550..76110 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QUE53_RS28000 (76120) | 76120..76734 | - | 615 | WP_001542527.1 | hypothetical protein | VF |
| QUE53_RS28005 (76752) | 76752..77849 | - | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QUE53_RS28010 (77862) | 77862..79415 | - | 1554 | WP_001384241.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| QUE53_RS28015 (79426) | 79426..79878 | - | 453 | WP_089520140.1 | hypothetical protein | VF |
| QUE53_RS28020 (79865) | 79865..81160 | - | 1296 | WP_286347572.1 | type 4b pilus protein PilO2 | - |
| QUE53_RS28025 (81153) | 81153..82835 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| QUE53_RS28030 (82849) | 82849..83286 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QUE53_RS28035 (83286) | 83286..84353 | - | 1068 | WP_012783947.1 | hypothetical protein | VF |
| QUE53_RS28040 (84977) | 84977..85273 | - | 297 | WP_000494780.1 | hypothetical protein | - |
| QUE53_RS28045 (85449) | 85449..85703 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QUE53_RS28050 (85897) | 85897..86679 | - | 783 | WP_137544063.1 | IS21 family transposase IS100kyp | Transposase |
| QUE53_RS28055 (86676) | 86676..87690 | - | 1015 | Protein_102 | IS21 family transposase IS100kyp | Transposase |
| QUE53_RS28060 (87826) | 87826..88509 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QUE53_RS28065 (88763) | 88763..89296 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| QUE53_RS28070 (89738) | 89738..90025 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| QUE53_RS28075 (89943) | 89943..90173 | - | 231 | WP_235658126.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|