MGE detailed information
MGE type: Prophage MGE length: 58864 bp
Accession: NZ_AP025683 Location: 1521593..1580456 Organism: Staphylococcus aureus strain JP025 Replicon: chromosome
Accession: NZ_AP025683 Location: 1521593..1580456 Organism: Staphylococcus aureus strain JP025 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAJP025_RS07125 (1516945) | 1516945..1517193 | + | 249 | WP_001151997.1 | ferredoxin | - |
| SAJP025_RS07130 (1517299) | 1517299..1517844 | - | 546 | WP_001186908.1 | ECF transporter S component | - |
| SAJP025_RS07135 (1518123) | 1518123..1518287 | - | 165 | WP_001799520.1 | hypothetical protein | - |
| SAJP025_RS07140 (1518492) | 1518492..1519412 | - | 921 | WP_000913246.1 | DUF1672 domain-containing protein | - |
| SAJP025_RS07145 (1519487) | 1519487..1519639 | - | 153 | WP_172609139.1 | hypothetical protein | - |
| SAJP025_RS07150 (1519626) | 1519626..1520540 | - | 915 | WP_000476887.1 | DUF1672 domain-containing protein | - |
| SAJP025_RS07155 (1520598) | 1520598..1521503 | - | 906 | WP_000913238.1 | DUF1672 domain-containing protein | - |
| SAJP025_RS07160 (1521593) | 1521593..1521778 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| SAJP025_RS07165 (1522027) | 1522027..1523010 | - | 984 | WP_024937002.1 | Leucotoxin LukDv | VF |
| SAJP025_RS07170 (1523006) | 1523006..1523944 | - | 939 | WP_000239544.1 | Gamma-hemolysin component C | VF |
| SAJP025_RS07175 (1524334) | 1524334..1525788 | - | 1455 | WP_000909204.1 | N-acetylmuramoyl-L-alanine amidase | - |
| SAJP025_RS07180 (1525799) | 1525799..1526101 | - | 303 | WP_000339141.1 | phage holin | - |
| SAJP025_RS07185 (1526237) | 1526237..1526536 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| SAJP025_RS07190 (1526582) | 1526582..1526746 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| SAJP025_RS07195 (1526739) | 1526739..1527128 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| SAJP025_RS07200 (1527128) | 1527128..1528594 | - | 1467 | WP_000067140.1 | BppU family phage baseplate upper protein | - |
| SAJP025_RS07205 (1528594) | 1528594..1530504 | - | 1911 | WP_000429562.1 | hypothetical protein | - |
| SAJP025_RS07210 (1530520) | 1530520..1530810 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| SAJP025_RS07215 (1530810) | 1530810..1532393 | - | 1584 | WP_000384463.1 | prophage endopeptidase tail family protein | - |
| SAJP025_RS07220 (1532402) | 1532402..1533226 | - | 825 | WP_001190528.1 | phage tail family protein | - |
| SAJP025_RS07225 (1533226) | 1533226..1539426 | - | 6201 | WP_001003440.1 | phage tail tape measure protein | - |
| SAJP025_RS07230 (1539440) | 1539440..1539598 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| SAJP025_RS07235 (1539649) | 1539649..1539990 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| SAJP025_RS07240 (1540048) | 1540048..1540503 | - | 456 | WP_000169128.1 | Ig-like domain-containing protein | - |
| SAJP025_RS07245 (1540595) | 1540595..1541236 | - | 642 | WP_000807536.1 | phage tail protein | - |
| SAJP025_RS07250 (1541271) | 1541271..1541666 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| SAJP025_RS07255 (1541667) | 1541667..1542068 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| SAJP025_RS07260 (1542065) | 1542065..1542397 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| SAJP025_RS07265 (1542409) | 1542409..1542687 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| SAJP025_RS07270 (1542756) | 1542756..1543919 | - | 1164 | WP_025173972.1 | phage major capsid protein | - |
| SAJP025_RS07275 (1543931) | 1543931..1544704 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| SAJP025_RS07280 (1544688) | 1544688..1545926 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| SAJP025_RS07285 (1545931) | 1545931..1547622 | - | 1692 | WP_000153549.1 | terminase large subunit | - |
| SAJP025_RS07290 (1547612) | 1547612..1547917 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| SAJP025_RS07295 (1548045) | 1548045..1548359 | - | 315 | WP_000160693.1 | HNH endonuclease | - |
| SAJP025_RS07300 (1548516) | 1548516..1548953 | - | 438 | WP_000513701.1 | transcriptional regulator | - |
| SAJP025_RS07305 (1548966) | 1548966..1550333 | - | 1368 | WP_014532980.1 | DEAD/DEAH box helicase | - |
| SAJP025_RS07310 (1550314) | 1550314..1550604 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| SAJP025_RS07315 (1550738) | 1550738..1550842 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| SAJP025_RS07320 (1550945) | 1550945..1553392 | - | 2448 | WP_000884853.1 | virulence-associated E family protein | - |
| SAJP025_RS07325 (1553445) | 1553445..1553645 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| SAJP025_RS07330 (1553713) | 1553713..1553865 | - | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| SAJP025_RS07335 (1553878) | 1553878..1554336 | - | 459 | WP_001129213.1 | hypothetical protein | - |
| SAJP025_RS07340 (1554329) | 1554329..1554481 | - | 153 | WP_000195790.1 | DUF1381 domain-containing protein | - |
| SAJP025_RS07345 (1554518) | 1554518..1555051 | - | 534 | WP_001066432.1 | dUTP pyrophosphatase | - |
| SAJP025_RS07350 (1555044) | 1555044..1555292 | - | 249 | WP_001065130.1 | DUF1024 family protein | - |
| SAJP025_RS07355 (1555306) | 1555306..1555554 | - | 249 | WP_014532979.1 | SAV1978 family virulence-associated passenger protein | - |
| SAJP025_RS07360 (1555554) | 1555554..1555808 | - | 255 | WP_000022731.1 | DUF3310 domain-containing protein | - |
| SAJP025_RS07365 (1555805) | 1555805..1556158 | - | 354 | WP_000029383.1 | SA1788 family PVL leukocidin-associated protein | - |
| SAJP025_RS07370 (1556159) | 1556159..1556344 | - | 186 | WP_001187257.1 | DUF3113 family protein | - |
| SAJP025_RS07375 (1556344) | 1556344..1556499 | - | 156 | WP_000152770.1 | helix-turn-helix transcriptional regulator | - |
| SAJP025_RS07380 (1556511) | 1556511..1558463 | - | 1953 | WP_001796208.1 | DNA polymerase | - |
| SAJP025_RS07385 (1558532) | 1558532..1559089 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| SAJP025_RS07390 (1559115) | 1559115..1560281 | - | 1167 | WP_000762532.1 | DUF2800 domain-containing protein | - |
| SAJP025_RS07395 (1560278) | 1560278..1560640 | - | 363 | WP_000279449.1 | hypothetical protein | - |
| SAJP025_RS07400 (1560655) | 1560655..1560978 | - | 324 | WP_000175000.1 | hypothetical protein | - |
| SAJP025_RS07405 (1561057) | 1561057..1561218 | - | 162 | WP_001285963.1 | DUF1270 family protein | - |
| SAJP025_RS07410 (1561231) | 1561231..1561494 | - | 264 | WP_001124190.1 | helix-turn-helix domain-containing protein | - |
| SAJP025_RS07415 (1561519) | 1561519..1561734 | - | 216 | WP_001036302.1 | hypothetical protein | - |
| SAJP025_RS07420 (1561789) | 1561789..1562154 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| SAJP025_RS07425 (1562123) | 1562123..1562368 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| SAJP025_RS07430 (1562424) | 1562424..1562633 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| SAJP025_RS07435 (1562623) | 1562623..1562766 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| SAJP025_RS07440 (1562795) | 1562795..1563571 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| SAJP025_RS07445 (1563585) | 1563585..1563821 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| SAJP025_RS07450 (1563973) | 1563973..1564287 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | - |
| SAJP025_RS07455 (1564300) | 1564300..1564761 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| SAJP025_RS07460 (1564779) | 1564779..1565363 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| SAJP025_RS07465 (1565593) | 1565593..1565739 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| SAJP025_RS07470 (1565736) | 1565736..1566350 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| SAJP025_RS07475 (1566476) | 1566476..1567681 | + | 1206 | WP_000264747.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| SAJP025_RS07480 (1567724) | 1567724..1569766 | - | 2043 | WP_000723489.1 | hypothetical protein | - |
| SAJP025_RS07485 (1569753) | 1569753..1570685 | - | 933 | WP_001574168.1 | DUF1672 domain-containing protein | - |
| SAJP025_RS07490 (1570937) | 1570937..1572688 | - | 1752 | WP_000987777.1 | two-component system sensor histidine kinase SrrB | - |
| SAJP025_RS07495 (1572669) | 1572669..1573394 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| SAJP025_RS07500 (1573527) | 1573527..1574264 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| SAJP025_RS07505 (1574257) | 1574257..1574799 | - | 543 | WP_000368652.1 | SMC-Scp complex subunit ScpB | - |
| SAJP025_RS07510 (1574792) | 1574792..1575523 | - | 732 | WP_000273366.1 | segregation/condensation protein A | - |
| SAJP025_RS07515 (1575615) | 1575615..1576121 | + | 507 | WP_001183424.1 | DUF309 domain-containing protein | - |
| SAJP025_RS07520 (1576199) | 1576199..1577086 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| SAJP025_RS07525 (1577135) | 1577135..1577584 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| SAJP025_RS07530 (1577689) | 1577689..1578231 | - | 543 | WP_000365236.1 | NUDIX hydrolase | - |
| SAJP025_RS07535 (1578313) | 1578313..1579221 | + | 909 | WP_001171333.1 | aldo/keto reductase | - |
| SAJP025_RS07540 (1579437) | 1579437..1579685 | - | 249 | WP_000995806.1 | hypothetical protein | - |
| SAJP025_RS07545 (1579701) | 1579701..1580456 | - | 756 | WP_000678227.1 | SDR family oxidoreductase | - |
| SAJP025_RS07550 (1580598) | 1580598..1581413 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| SAJP025_RS07555 (1581518) | 1581518..1582438 | - | 921 | WP_000454059.1 | ribonuclease Z | - |
| SAJP025_RS07560 (1582751) | 1582751..1584235 | + | 1485 | WP_000105073.1 | glucose-6-phosphate dehydrogenase | - |
| SAJP025_RS07565 (1584465) | 1584465..1585331 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|