MGE detailed information
MGE type: Mobilizable plasmid MGE length: 92278 bp
Accession: NZ_AP025206 Location: 1..92278 Organism: Escherichia coli strain 2017.04.03CC Replicon: plasmid p20170403CC-1
Accession: NZ_AP025206 Location: 1..92278 Organism: Escherichia coli strain 2017.04.03CC Replicon: plasmid p20170403CC-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH27_RS21875 (VEGS17_A42430) | 480..1742 | + | 1263 | WP_094318251.1 | hypothetical protein | - |
| LPH27_RS21880 (VEGS17_A42440) | 1815..2321 | + | 507 | WP_000021754.1 | hypothetical protein | - |
| LPH27_RS21885 (VEGS17_A42450) | 2516..3694 | + | 1179 | WP_094318253.1 | hypothetical protein | - |
| LPH27_RS21890 (VEGS17_A42460) | 3822..4052 | + | 231 | WP_223656858.1 | hypothetical protein | - |
| LPH27_RS21895 (VEGS17_A42470) | 5128..5484 | - | 357 | WP_001062545.1 | hypothetical protein | - |
| LPH27_RS21900 (VEGS17_A42480) | 5485..5892 | - | 408 | WP_223656859.1 | hypothetical protein | - |
| LPH27_RS21905 (VEGS17_A42490) | 6244..6633 | + | 390 | WP_000506724.1 | S24 family peptidase | - |
| LPH27_RS21910 (VEGS17_A42500) | 6706..6927 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LPH27_RS21915 (VEGS17_A42510) | 6927..7307 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LPH27_RS21920 (VEGS17_A42520) | 7312..7491 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| LPH27_RS21925 (VEGS17_A42530) | 7519..8562 | + | 1044 | WP_112918711.1 | DUF968 domain-containing protein | - |
| LPH27_RS21930 (VEGS17_A42540) | 8651..9103 | + | 453 | WP_001326849.1 | late promoter-activating protein | - |
| LPH27_RS21935 (VEGS17_A42550) | 9189..10382 | + | 1194 | WP_032214401.1 | hypothetical protein | - |
| LPH27_RS21940 (VEGS17_A42560) | 10382..11866 | + | 1485 | WP_000124159.1 | hypothetical protein | - |
| LPH27_RS21945 (VEGS17_A42570) | 11891..12742 | - | 852 | WP_000611656.1 | phage repressor protein C1 | - |
| LPH27_RS21950 (VEGS17_A42580) | 12853..13062 | - | 210 | WP_112918712.1 | c1 repressor inactivator | - |
| LPH27_RS21955 (VEGS17_A42590) | 13659..13880 | + | 222 | WP_032214402.1 | hypothetical protein | - |
| LPH27_RS21960 (VEGS17_A42600) | 13888..14919 | + | 1032 | WP_000067532.1 | site-specific integrase | - |
| LPH27_RS21965 (VEGS17_A42610) | 14970..15281 | + | 312 | WP_032214403.1 | hypothetical protein | - |
| LPH27_RS21970 (VEGS17_A42620) | 15529..15825 | + | 297 | Protein_19 | Ref family protein | - |
| LPH27_RS21980 (VEGS17_A42650) | 16949..17272 | - | 324 | WP_001175593.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LPH27_RS21985 | 17378..18511 | + | 1134 | WP_001089729.1 | permease | - |
| LPH27_RS21990 | 18639..19043 | - | 405 | Protein_23 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LPH27_RS21995 (VEGS17_A42690) | 19211..19894 | + | 684 | Protein_24 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| LPH27_RS22000 (VEGS17_A42700) | 19928..21679 | - | 1752 | Protein_25 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LPH27_RS22005 | 21683..22075 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LPH27_RS22010 (VEGS17_A42720) | 22213..23097 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| LPH27_RS22015 (VEGS17_A42730) | 23129..24328 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| LPH27_RS22020 (VEGS17_A42740) | 24434..25084 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LPH27_RS22025 (VEGS17_A42750) | 25116..25358 | - | 243 | WP_000844627.1 | transposase | - |
| LPH27_RS22030 (VEGS17_A42760) | 25521..26066 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| LPH27_RS22035 (VEGS17_A42770) | 26203..26775 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| LPH27_RS22040 (VEGS17_A42780) | 26812..28203 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| LPH27_RS22045 (VEGS17_A42790) | 28236..28664 | + | 429 | Protein_34 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LPH27_RS22050 (VEGS17_A42800) | 28983..29639 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| LPH27_RS22055 | 30034..30650 | + | 617 | Protein_36 | transposase | - |
| LPH27_RS22060 (VEGS17_A42840) | 30717..31421 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LPH27_RS22065 (VEGS17_A42850) | 31427..31567 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| LPH27_RS22070 (VEGS17_A42860) | 32053..32790 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LPH27_RS22075 (VEGS17_A42870) | 32787..33011 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| LPH27_RS22080 (VEGS17_A42880) | 33222..34715 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| LPH27_RS22085 (VEGS17_A42890) | 34746..35630 | + | 885 | WP_012728215.1 | DUF3363 domain-containing protein | - |
| LPH27_RS22090 (VEGS17_A42900) | 35847..37061 | + | 1215 | WP_065311137.1 | Bicyclomycin resistance protein | ARG |
| LPH27_RS22095 (VEGS17_A42910) | 37089..37394 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| LPH27_RS22100 (VEGS17_A42920) | 37506..37694 | + | 189 | Protein_45 | IS91 family transposase | - |
| LPH27_RS22105 | 37661..38862 | - | 1202 | Protein_46 | tetracycline efflux MFS transporter Tet(A) | - |
| LPH27_RS22110 (VEGS17_A42950) | 38968..39618 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LPH27_RS22115 (VEGS17_A42960) | 39650..39892 | - | 243 | WP_000844627.1 | transposase | - |
| LPH27_RS22120 (VEGS17_A42970) | 39950..40666 | - | 717 | Protein_49 | Tn3 family transposase | - |
| LPH27_RS22125 (VEGS17_A42980) | 40733..43570 | - | 2838 | Protein_50 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LPH27_RS22130 (VEGS17_A43000) | 43627..44331 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LPH27_RS22135 (VEGS17_A43010) | 44527..45387 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| LPH27_RS22140 (VEGS17_A43020) | 45618..46454 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| LPH27_RS22145 (VEGS17_A43030) | 46454..47257 | - | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LPH27_RS22150 (VEGS17_A43040) | 47318..48133 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| LPH27_RS22155 (VEGS17_A43050) | 48381..49085 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LPH27_RS22160 (VEGS17_A43060) | 49155..49628 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| LPH27_RS22165 (VEGS17_A43070) | 49784..50797 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| LPH27_RS22170 (VEGS17_A43080) | 50857..51561 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LPH27_RS22175 (VEGS17_A43100) | 51703..52779 | + | 1077 | WP_072146639.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| LPH27_RS22180 (VEGS17_A43110) | 52968..55277 | + | 2310 | Protein_61 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| LPH27_RS22185 (VEGS17_A43120) | 55301..55567 | + | 267 | Protein_62 | Ref family protein | - |
| LPH27_RS22190 (VEGS17_A43130) | 55756..56397 | + | 642 | WP_016246529.1 | hypothetical protein | - |
| LPH27_RS22195 (VEGS17_A43140) | 56495..57505 | - | 1011 | WP_032219104.1 | DUF2971 domain-containing protein | - |
| LPH27_RS22200 (VEGS17_A43150) | 57588..57836 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| LPH27_RS22205 (VEGS17_A43160) | 57833..58273 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| LPH27_RS22210 | 58307..60429 | - | 2123 | Protein_67 | helicase | - |
| LPH27_RS22215 (VEGS17_A43190) | 60668..61081 | + | 414 | Protein_68 | collagenase-like protease | - |
| LPH27_RS22220 | 61186..61314 | - | 129 | WP_001164804.1 | DUF2474 domain-containing protein | - |
| LPH27_RS22225 (VEGS17_A43200) | 61314..62324 | - | 1011 | WP_000510495.1 | cytochrome d ubiquinol oxidase subunit II | - |
| LPH27_RS22230 (VEGS17_A43210) | 62324..63724 | - | 1401 | WP_032185977.1 | cytochrome ubiquinol oxidase subunit I | - |
| LPH27_RS22235 (VEGS17_A43220) | 63953..64222 | - | 270 | Protein_72 | hypothetical protein | - |
| LPH27_RS22240 (VEGS17_A43230) | 64805..65056 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LPH27_RS22245 (VEGS17_A43240) | 65053..65340 | + | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LPH27_RS22250 | 65708..65821 | - | 114 | Protein_75 | alkaline phosphatase | - |
| LPH27_RS22255 (VEGS17_A43260) | 65820..66025 | + | 206 | Protein_76 | hypothetical protein | - |
| LPH27_RS22260 (VEGS17_A43270) | 66200..69697 | - | 3498 | WP_088209975.1 | Outer membrane protein IcsA autotransporter | VF |
| LPH27_RS22265 (VEGS17_A43280) | 70282..70500 | - | 219 | Protein_78 | IS91 family transposase | - |
| LPH27_RS22270 (VEGS17_A43300) | 70548..71454 | + | 907 | Protein_79 | IS3 family transposase ISEc52 | Transposase |
| LPH27_RS22275 (VEGS17_A43310) | 71447..71869 | - | 423 | Protein_80 | IncHI-type conjugal transfer protein TrhH | - |
| LPH27_RS22280 (VEGS17_A43320) | 71859..72614 | - | 756 | WP_229266314.1 | conjugal transfer protein TraF | - |
| LPH27_RS22290 (VEGS17_A43350) | 73367..73681 | - | 315 | WP_223438619.1 | hypothetical protein | - |
| LPH27_RS22295 (VEGS17_A43360) | 74468..74806 | - | 339 | WP_223656872.1 | hypothetical protein | - |
| LPH27_RS22300 (VEGS17_A43370) | 74809..75339 | - | 531 | WP_077478204.1 | hypothetical protein | - |
| LPH27_RS22305 (VEGS17_A43380) | 76365..76850 | + | 486 | WP_000071636.1 | conjugative transfer protein MobI(A/C) | - |
| LPH27_RS22310 (VEGS17_A43390) | 76847..77569 | + | 723 | WP_000133023.1 | hypothetical protein | - |
| LPH27_RS22315 (VEGS17_A43400) | 77580..78395 | + | 816 | WP_223656871.1 | hypothetical protein | Relaxase |
| LPH27_RS22325 (VEGS17_A43420) | 79271..80287 | - | 1017 | WP_047668699.1 | hypothetical protein | - |
| LPH27_RS22330 (VEGS17_A43430) | 80443..80739 | - | 297 | Protein_91 | DUF1643 domain-containing protein | - |
| LPH27_RS22335 (VEGS17_A43440) | 80868..81683 | - | 816 | WP_112918727.1 | hypothetical protein | - |
| LPH27_RS22340 (VEGS17_A43450) | 81693..83282 | - | 1590 | WP_112918728.1 | hypothetical protein | - |
| LPH27_RS22345 (VEGS17_A43460) | 83342..85048 | - | 1707 | WP_094318215.1 | hypothetical protein | - |
| LPH27_RS22350 (VEGS17_A43470) | 85274..86275 | - | 1002 | WP_000038866.1 | ParB family protein | - |
| LPH27_RS22355 (VEGS17_A43480) | 86292..87488 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| LPH27_RS22360 (VEGS17_A43490) | 87657..88466 | - | 810 | WP_032247076.1 | GIY-YIG nuclease family protein | - |
| LPH27_RS22365 (VEGS17_A43500) | 88759..89643 | - | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| LPH27_RS22370 (VEGS17_A43510) | 89979..90371 | - | 393 | WP_112918729.1 | hypothetical protein | - |
| LPH27_RS22375 (VEGS17_A43520) | 90475..91443 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|