MGE detailed information
MGE type: IS/Tn MGE length: 1149 bp
Accession: NZ_AP025205 Location: 2367063..2368211 Organism: Escherichia coli strain 2017.04.03CC Replicon: chromosome
Accession: NZ_AP025205 Location: 2367063..2368211 Organism: Escherichia coli strain 2017.04.03CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH27_RS11340 (2362466) | 2362466..2362642 | - | 177 | WP_000813794.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| LPH27_RS11345 (2362864) | 2362864..2363094 | + | 231 | WP_000494244.1 | YncJ family protein | - |
| LPH27_RS11350 (2363186) | 2363186..2365147 | - | 1962 | WP_001303492.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| LPH27_RS11355 (2365220) | 2365220..2365756 | - | 537 | WP_000429155.1 | DNA-binding transcriptional regulator SutR | - |
| LPH27_RS11360 (2365848) | 2365848..2367023 | + | 1176 | WP_001236265.1 | BenE family transporter YdcO | - |
| LPH27_RS11365 (2367063) | 2367063..2368271 | - | 1209 | WP_000826416.1 | RNA-guided endonuclease TnpB family protein | - |
| LPH27_RS11370 (2368279) | 2368279..2368704 | + | 426 | Protein_2224 | IS200/IS605 family transposase | - |
| LPH27_RS11375 (2368803) | 2368803..2369471 | - | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| LPH27_RS11380 (2369774) | 2369774..2370367 | - | 594 | WP_001723473.1 | tellurite resistance methyltransferase TehB | - |
| LPH27_RS11385 (2370364) | 2370364..2371356 | - | 993 | WP_001296725.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| LPH27_RS11390 (2371480) | 2371480..2372142 | + | 663 | Protein_2228 | YdcK family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | IS/Tn | TA75073 | NZ_CP020543 | 2433298..2434446 | 0.008 |