MGE detailed information
MGE type: Genomic_island MGE length: 22723 bp
Accession: NZ_AP025180 Location: 3858181..3880903 Organism: Escherichia coli strain JP538 Replicon: chromosome
Accession: NZ_AP025180 Location: 3858181..3880903 Organism: Escherichia coli strain JP538 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R5G_RS18955 (3857335) | 3857335..3857712 | + | 378 | WP_001077738.1 | hypothetical protein | - |
| R5G_RS18960 (3858181) | 3858181..3859317 | + | 1137 | WP_000420722.1 | ISAs1 family transposase ISEc1 | Transposase |
| R5G_RS18965 (3859388) | 3859388..3859837 | + | 450 | WP_001372445.1 | RHS element protein dsORF-h1 | - |
| R5G_RS18970 (3859914) | 3859914..3864143 | + | 4230 | WP_112014449.1 | hypothetical protein | VF |
| R5G_RS18975 (3864121) | 3864121..3864513 | + | 393 | WP_001101839.1 | hypothetical protein | - |
| R5G_RS18980 (3864944) | 3864944..3866080 | + | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| R5G_RS18985 (3866121) | 3866121..3866891 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| R5G_RS18990 (3867072) | 3867072..3867518 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| R5G_RS18995 (3867561) | 3867561..3870005 | - | 2445 | WP_000973083.1 | hypothetical protein | VF |
| R5G_RS19000 (3870245) | 3870245..3870823 | + | 579 | WP_000284050.1 | hypothetical protein | VF |
| R5G_RS19005 (3871029) | 3871029..3871796 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| R5G_RS19010 (3871767) | 3871767..3872507 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| R5G_RS19015 (3872663) | 3872663..3872941 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| R5G_RS19020 (3872944) | 3872944..3873204 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| R5G_RS19025 (3873414) | 3873414..3874163 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
| R5G_RS19030 (3874339) | 3874339..3874836 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| R5G_RS19035 (3875060) | 3875060..3876772 | - | 1713 | Protein_3731 | hypothetical protein | VF |
| R5G_RS19040 (3876744) | 3876744..3877528 | + | 785 | Protein_3732 | hypothetical protein | VF |
| R5G_RS19045 (3877599) | 3877599..3878654 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| R5G_RS19050 (3878706) | 3878706..3878999 | + | 294 | WP_096216098.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| R5G_RS19055 (3879002) | 3879002..3879400 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| R5G_RS19060 (3879410) | 3879410..3879862 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| R5G_RS19065 (3880180) | 3880180..3880386 | + | 207 | Protein_3737 | RtcB family protein | - |
| R5G_RS19070 (3880382) | 3880382..3880903 | + | 522 | Protein_3738 | peptide chain release factor H | - |
| R5G_RS19075 (3880960) | 3880960..3882417 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| R5G_RS19080 (3882678) | 3882678..3883136 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (3883732) | 3883732..3883812 | + | 81 | NuclAT_12 | - | - |
| - (3883732) | 3883732..3883812 | + | 81 | NuclAT_12 | - | - |
| - (3883732) | 3883732..3883812 | + | 81 | NuclAT_12 | - | - |
| - (3883732) | 3883732..3883812 | + | 81 | NuclAT_12 | - | - |
| R5G_RS19085 (3883228) | 3883228..3884472 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| R5G_RS19090 (3884530) | 3884530..3884931 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|