MGE detailed information
MGE type: Integron MGE length: 37888 bp
Accession: NZ_AP025148 Location: 1555498..1593385 Organism: Vibrio penaeicida strain IFO 15641 Replicon: chromosome
Accession: NZ_AP025148 Location: 1555498..1593385 Organism: Vibrio penaeicida strain IFO 15641 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO90_RS25970 | 1551307..1551675 | + | 369 | WP_126606400.1 | hypothetical protein | - |
| LDO90_RS25975 | 1551668..1552741 | + | 1074 | WP_126606401.1 | YqaJ viral recombinase family protein | - |
| LDO90_RS25980 | 1552752..1553708 | + | 957 | WP_126606402.1 | RecT family recombinase | - |
| LDO90_RS25985 | 1553929..1554174 | + | 246 | WP_104402999.1 | excisionase | - |
| LDO90_RS25990 | 1554158..1555306 | + | 1149 | WP_126606403.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| LDO90_RS25995 | 1555498..1555818 | - | 321 | WP_126606404.1 | hypothetical protein | - |
| LDO90_RS26000 | 1556759..1557391 | - | 633 | WP_126606405.1 | hypothetical protein | - |
| LDO90_RS26005 | 1558819..1559454 | - | 636 | WP_126606407.1 | hypothetical protein | - |
| LDO90_RS26010 | 1559480..1559599 | - | 120 | WP_126606413.1 | DUF3265 domain-containing protein | - |
| LDO90_RS26015 | 1559587..1560102 | - | 516 | WP_126606408.1 | hypothetical protein | - |
| LDO90_RS26020 | 1560130..1560222 | - | 93 | WP_075111373.1 | DUF3265 domain-containing protein | - |
| LDO90_RS26025 | 1560237..1560992 | - | 756 | WP_126606409.1 | DUF5677 domain-containing protein | - |
| LDO90_RS26030 | 1561351..1561590 | + | 240 | WP_126606411.1 | hypothetical protein | - |
| LDO90_RS26035 | 1562300..1562410 | - | 111 | WP_224055933.1 | DUF3265 domain-containing protein | - |
| LDO90_RS26040 | 1562417..1562926 | - | 510 | WP_224055954.1 | hypothetical protein | - |
| LDO90_RS26050 | 1563597..1564709 | + | 1113 | Protein_1355 | IS3 family transposase ISLpn8 | Transposase |
| LDO90_RS26055 | 1564964..1565329 | - | 366 | WP_126608616.1 | hypothetical protein | - |
| LDO90_RS26060 | 1565311..1565790 | - | 480 | WP_126608615.1 | type VI secretion system amidase effector protein Tae4 | - |
| LDO90_RS26065 | 1567385..1567729 | - | 345 | WP_126607806.1 | hypothetical protein | - |
| LDO90_RS26070 | 1569064..1569156 | - | 93 | WP_221768543.1 | DUF3265 domain-containing protein | - |
| LDO90_RS26075 | 1569266..1569538 | + | 273 | WP_126608258.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LDO90_RS26080 | 1569535..1570032 | + | 498 | WP_017053840.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LDO90_RS26085 | 1570138..1570545 | + | 408 | WP_126608259.1 | hypothetical protein | - |
| LDO90_RS26090 | 1571297..1571632 | - | 336 | WP_126607678.1 | hypothetical protein | - |
| LDO90_RS26095 | 1571983..1573094 | + | 1112 | WP_224055502.1 | IS3 family transposase ISLpn8 | Transposase |
| LDO90_RS26100 | 1573399..1573575 | - | 177 | WP_224055503.1 | hypothetical protein | - |
| LDO90_RS26105 | 1573584..1573862 | - | 279 | WP_224055504.1 | GNAT family N-acetyltransferase | - |
| LDO90_RS26110 | 1573995..1574378 | - | 384 | WP_224055505.1 | hypothetical protein | - |
| LDO90_RS26115 | 1574537..1574989 | - | 453 | WP_126609048.1 | GNAT family N-acetyltransferase | - |
| LDO90_RS26120 | 1576007..1576294 | - | 288 | WP_104403463.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LDO90_RS26125 | 1576291..1576572 | - | 282 | WP_011080399.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LDO90_RS26130 | 1576975..1577931 | + | 957 | WP_221768525.1 | IS110 family transposase ISSde13 | Transposase |
| LDO90_RS26135 | 1577975..1578343 | - | 369 | WP_224055563.1 | hypothetical protein | - |
| LDO90_RS26140 | 1578380..1579534 | + | 1155 | Protein_1373 | IS3 family transposase ISVpa2 | Transposase |
| LDO90_RS26145 | 1580202..1580543 | - | 342 | WP_126610338.1 | hypothetical protein | - |
| LDO90_RS26150 | 1581277..1581723 | - | 447 | WP_126608696.1 | SMI1/KNR4 family protein | - |
| LDO90_RS26155 | 1581861..1582466 | - | 606 | WP_126608697.1 | hypothetical protein | - |
| LDO90_RS26160 | 1582635..1582955 | - | 321 | WP_126608698.1 | GFA family protein | - |
| LDO90_RS26165 | 1583489..1583581 | - | 93 | WP_072612521.1 | DUF3265 domain-containing protein | - |
| LDO90_RS26170 | 1583608..1584084 | - | 477 | WP_224055564.1 | hypothetical protein | - |
| LDO90_RS26180 | 1585298..1585777 | - | 480 | WP_224055565.1 | hypothetical protein | - |
| LDO90_RS26185 | 1586347..1586838 | - | 492 | WP_126606841.1 | hypothetical protein | - |
| LDO90_RS26190 | 1586993..1587331 | - | 339 | WP_126606840.1 | hypothetical protein | - |
| LDO90_RS26195 | 1588348..1589094 | - | 747 | WP_224055567.1 | hypothetical protein | - |
| LDO90_RS26200 | 1589370..1590326 | + | 957 | WP_224056071.1 | IS110 family transposase ISSde13 | Transposase |
| LDO90_RS26205 | 1590349..1590918 | - | 570 | WP_126607347.1 | hypothetical protein | - |
| LDO90_RS26210 | 1591072..1591473 | - | 402 | WP_185829773.1 | GIY-YIG nuclease family protein | - |
| LDO90_RS26215 | 1591512..1591604 | - | 93 | WP_221768524.1 | DUF3265 domain-containing protein | - |
| LDO90_RS26220 | 1591635..1591949 | - | 315 | WP_126607345.1 | hypothetical protein | - |
| LDO90_RS26225 | 1592597..1593385 | - | 789 | WP_224055618.1 | hypothetical protein | - |
| LDO90_RS26230 | 1594198..1594899 | - | 702 | WP_221768585.1 | Asp/Glu racemase | - |
| LDO90_RS26235 | 1594953..1596011 | - | 1059 | WP_126609595.1 | carbon-nitrogen hydrolase family protein | - |
| LDO90_RS26240 | 1596021..1596935 | - | 915 | WP_126609596.1 | fumarylacetoacetate hydrolase family protein | - |
| LDO90_RS26245 | 1596997..1598127 | - | 1131 | WP_126609597.1 | cupin domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|