MGE detailed information
MGE type: Integron MGE length: 37891 bp
Accession: NZ_AP025145 Location: 1645260..1683150 Organism: Vibrio penaeicida strain IFO 15640T Replicon: chromosome
Accession: NZ_AP025145 Location: 1645260..1683150 Organism: Vibrio penaeicida strain IFO 15640T Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO37_RS25655 | 1641069..1641437 | + | 369 | WP_126606400.1 | hypothetical protein | - |
| LDO37_RS25660 | 1641430..1642503 | + | 1074 | WP_126606401.1 | YqaJ viral recombinase family protein | - |
| LDO37_RS25665 | 1642514..1643470 | + | 957 | WP_126606402.1 | RecT family recombinase | - |
| LDO37_RS25670 | 1643691..1643936 | + | 246 | WP_104402999.1 | excisionase | - |
| LDO37_RS25675 | 1643920..1645068 | + | 1149 | WP_126606403.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| LDO37_RS25680 | 1645260..1645580 | - | 321 | WP_126606404.1 | hypothetical protein | - |
| LDO37_RS25685 | 1646521..1647153 | - | 633 | WP_126606405.1 | hypothetical protein | - |
| LDO37_RS25690 | 1648581..1649216 | - | 636 | WP_126606407.1 | hypothetical protein | - |
| LDO37_RS25695 | 1649242..1649361 | - | 120 | WP_126606413.1 | DUF3265 domain-containing protein | - |
| LDO37_RS25700 | 1649349..1649864 | - | 516 | WP_126606408.1 | hypothetical protein | - |
| LDO37_RS25705 | 1649892..1649984 | - | 93 | WP_075111373.1 | DUF3265 domain-containing protein | - |
| LDO37_RS25710 | 1649999..1650754 | - | 756 | WP_126606409.1 | DUF5677 domain-containing protein | - |
| LDO37_RS25715 | 1651113..1651352 | + | 240 | WP_126606411.1 | hypothetical protein | - |
| LDO37_RS25720 | 1652062..1652172 | - | 111 | WP_224055933.1 | DUF3265 domain-containing protein | - |
| LDO37_RS25725 | 1652179..1652688 | - | 510 | WP_224055954.1 | hypothetical protein | - |
| LDO37_RS25735 | 1653359..1654472 | + | 1114 | Protein_1439 | IS3 family transposase | - |
| LDO37_RS25740 | 1654727..1655092 | - | 366 | WP_126608616.1 | hypothetical protein | - |
| LDO37_RS25745 | 1655074..1655553 | - | 480 | WP_126608615.1 | type VI secretion system amidase effector protein Tae4 | - |
| LDO37_RS25750 | 1657148..1657492 | - | 345 | WP_126607806.1 | hypothetical protein | - |
| LDO37_RS25755 | 1658827..1658919 | - | 93 | WP_221768543.1 | DUF3265 domain-containing protein | - |
| LDO37_RS25760 | 1659029..1659301 | + | 273 | WP_126608258.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LDO37_RS25765 | 1659298..1659795 | + | 498 | WP_017053840.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LDO37_RS25770 | 1659901..1660308 | + | 408 | WP_126608259.1 | hypothetical protein | - |
| LDO37_RS25775 | 1661060..1661395 | - | 336 | WP_126607678.1 | hypothetical protein | - |
| LDO37_RS25780 | 1661746..1662859 | + | 1114 | Protein_1448 | IS3 family transposase | - |
| LDO37_RS25785 | 1663164..1663340 | - | 177 | WP_224055503.1 | hypothetical protein | - |
| LDO37_RS25790 | 1663349..1663627 | - | 279 | WP_224055504.1 | GNAT family N-acetyltransferase | - |
| LDO37_RS25795 | 1663760..1664143 | - | 384 | WP_224055505.1 | hypothetical protein | - |
| LDO37_RS25800 | 1664302..1664754 | - | 453 | WP_126609048.1 | GNAT family N-acetyltransferase | - |
| LDO37_RS25805 | 1665772..1666059 | - | 288 | WP_104403463.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LDO37_RS25810 | 1666056..1666337 | - | 282 | WP_011080399.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LDO37_RS25815 | 1666740..1667697 | + | 958 | Protein_1455 | IS110 family transposase ISSde13 | Transposase |
| LDO37_RS25820 | 1667741..1668109 | - | 369 | WP_224055563.1 | hypothetical protein | - |
| LDO37_RS25825 | 1668146..1669299 | + | 1154 | WP_224055256.1 | IS3 family transposase ISVpa2 | Transposase |
| LDO37_RS25830 | 1669967..1670308 | - | 342 | WP_126610338.1 | hypothetical protein | - |
| LDO37_RS25835 | 1671042..1671488 | - | 447 | WP_126608696.1 | SMI1/KNR4 family protein | - |
| LDO37_RS25840 | 1671626..1672231 | - | 606 | WP_126608697.1 | hypothetical protein | - |
| LDO37_RS25845 | 1672400..1672720 | - | 321 | WP_126608698.1 | GFA family protein | - |
| LDO37_RS25850 | 1673254..1673346 | - | 93 | WP_072612521.1 | DUF3265 domain-containing protein | - |
| LDO37_RS25855 | 1673373..1673849 | - | 477 | WP_224055564.1 | hypothetical protein | - |
| LDO37_RS25865 | 1675063..1675542 | - | 480 | WP_224055565.1 | hypothetical protein | - |
| LDO37_RS25870 | 1676112..1676603 | - | 492 | WP_126606841.1 | hypothetical protein | - |
| LDO37_RS25875 | 1676758..1677096 | - | 339 | WP_126606840.1 | hypothetical protein | - |
| LDO37_RS25880 | 1678113..1678859 | - | 747 | WP_224055567.1 | hypothetical protein | - |
| LDO37_RS25885 | 1679135..1680091 | + | 957 | WP_224056071.1 | IS110 family transposase ISSde13 | Transposase |
| LDO37_RS25890 | 1680114..1680683 | - | 570 | WP_126607347.1 | hypothetical protein | - |
| LDO37_RS25895 | 1680837..1681238 | - | 402 | WP_185829773.1 | GIY-YIG nuclease family protein | - |
| LDO37_RS25900 | 1681277..1681369 | - | 93 | WP_221768524.1 | DUF3265 domain-containing protein | - |
| LDO37_RS25905 | 1681400..1681714 | - | 315 | WP_126607345.1 | hypothetical protein | - |
| LDO37_RS25910 | 1682362..1683150 | - | 789 | WP_224055618.1 | hypothetical protein | - |
| LDO37_RS25915 | 1683963..1684664 | - | 702 | WP_221768585.1 | Asp/Glu racemase | - |
| LDO37_RS25920 | 1684718..1685776 | - | 1059 | WP_126609595.1 | carbon-nitrogen hydrolase family protein | - |
| LDO37_RS25925 | 1685786..1686700 | - | 915 | WP_126609596.1 | fumarylacetoacetate hydrolase family protein | - |
| LDO37_RS25930 | 1686762..1687892 | - | 1131 | WP_126609597.1 | cupin domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|