MGE detailed information
MGE type: Prophage MGE length: 66096 bp
Accession: NZ_AP024738 Location: 1556064..1622159 Organism: Staphylococcus aureus strain 59731 Replicon: chromosome
Accession: NZ_AP024738 Location: 1556064..1622159 Organism: Staphylococcus aureus strain 59731 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCX20_RS07445 (1552325) | 1552325..1553704 | - | 1380 | WP_000902120.1 | ATP-dependent DNA helicase RecQ | - |
| OCX20_RS07450 (1553694) | 1553694..1554647 | - | 954 | WP_001163801.1 | helix-turn-helix domain-containing protein | - |
| OCX20_RS07455 (1554755) | 1554755..1555003 | + | 249 | WP_001151997.1 | ferredoxin | - |
| OCX20_RS07460 (1555109) | 1555109..1555654 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| OCX20_RS07465 (1556064) | 1556064..1556978 | - | 915 | WP_000476340.1 | DUF1672 domain-containing protein | - |
| OCX20_RS07470 (1557035) | 1557035..1557952 | - | 918 | WP_000476881.1 | DUF1672 domain-containing protein | - |
| OCX20_RS07475 (1558010) | 1558010..1558915 | - | 906 | WP_000476866.1 | DUF1672 domain-containing protein | - |
| OCX20_RS07480 (1559006) | 1559006..1559191 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| OCX20_RS07485 (1559436) | 1559436..1559891 | - | 456 | WP_000971220.1 | hypothetical protein | - |
| OCX20_RS07490 (1559888) | 1559888..1560475 | - | 588 | WP_117219087.1 | hypothetical protein | - |
| OCX20_RS07495 (1560867) | 1560867..1562321 | - | 1455 | WP_117219086.1 | N-acetylmuramoyl-L-alanine amidase | - |
| OCX20_RS07500 (1562332) | 1562332..1562634 | - | 303 | WP_000339144.1 | phage holin | - |
| OCX20_RS07505 (1562770) | 1562770..1563069 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| OCX20_RS07510 (1563115) | 1563115..1563279 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| OCX20_RS07515 (1563272) | 1563272..1563661 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| OCX20_RS07520 (1563661) | 1563661..1565127 | - | 1467 | WP_117219085.1 | BppU family phage baseplate upper protein | - |
| OCX20_RS07525 (1565127) | 1565127..1567037 | - | 1911 | WP_000429555.1 | hypothetical protein | - |
| OCX20_RS07530 (1567053) | 1567053..1567343 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| OCX20_RS07535 (1567343) | 1567343..1568926 | - | 1584 | WP_031768052.1 | prophage endopeptidase tail family protein | - |
| OCX20_RS07540 (1568935) | 1568935..1569759 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| OCX20_RS07545 (1569759) | 1569759..1575935 | - | 6177 | WP_119305742.1 | phage tail tape measure protein | - |
| OCX20_RS07550 (1575949) | 1575949..1576107 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| OCX20_RS07555 (1576149) | 1576149..1576499 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| OCX20_RS07560 (1576557) | 1576557..1577012 | - | 456 | WP_031768047.1 | Ig-like domain-containing protein | - |
| OCX20_RS07565 (1577104) | 1577104..1577745 | - | 642 | WP_117219083.1 | phage tail protein | - |
| OCX20_RS07570 (1577780) | 1577780..1578175 | - | 396 | WP_001636966.1 | DUF3168 domain-containing protein | - |
| OCX20_RS07575 (1578176) | 1578176..1578577 | - | 402 | WP_088607379.1 | hypothetical protein | - |
| OCX20_RS07580 (1578574) | 1578574..1578906 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| OCX20_RS07585 (1578918) | 1578918..1579196 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| OCX20_RS07590 (1579265) | 1579265..1580428 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| OCX20_RS07595 (1580440) | 1580440..1581213 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| OCX20_RS07600 (1581197) | 1581197..1582435 | - | 1239 | WP_001100665.1 | phage portal protein | - |
| OCX20_RS07605 (1582440) | 1582440..1584131 | - | 1692 | WP_000153544.1 | terminase large subunit | - |
| OCX20_RS07610 (1584121) | 1584121..1584426 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| OCX20_RS07615 (1584554) | 1584554..1584868 | - | 315 | WP_000160693.1 | HNH endonuclease | - |
| OCX20_RS07620 (1585025) | 1585025..1585462 | - | 438 | WP_000528512.1 | transcriptional regulator | - |
| OCX20_RS07625 (1585475) | 1585475..1586842 | - | 1368 | WP_119305744.1 | DEAD/DEAH box helicase | - |
| OCX20_RS07630 (1586823) | 1586823..1587113 | - | 291 | WP_000665204.1 | VRR-NUC domain-containing protein | - |
| OCX20_RS07635 (1587247) | 1587247..1587351 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| OCX20_RS07640 (1587454) | 1587454..1589901 | - | 2448 | WP_172576659.1 | virulence-associated E family protein | - |
| OCX20_RS07645 (1589953) | 1589953..1590153 | - | 201 | WP_043854698.1 | DUF1514 family protein | - |
| OCX20_RS07650 (1590221) | 1590221..1590373 | - | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| OCX20_RS07655 (1590370) | 1590370..1590576 | - | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| OCX20_RS07660 (1590613) | 1590613..1591149 | - | 537 | WP_103150126.1 | dUTPase | - |
| OCX20_RS07665 (1591142) | 1591142..1591312 | - | 171 | WP_000714407.1 | hypothetical protein | - |
| OCX20_RS07670 (1591299) | 1591299..1591553 | - | 255 | WP_117219082.1 | DUF1024 family protein | - |
| OCX20_RS07675 (1591745) | 1591745..1592068 | - | 324 | WP_258922478.1 | hypothetical protein | - |
| OCX20_RS07680 (1592101) | 1592101..1592247 | - | 147 | Protein_1508 | acetyltransferase | - |
| OCX20_RS07685 (1592262) | 1592262..1592510 | - | 249 | WP_117219081.1 | phi PVL orf 51-like protein | - |
| OCX20_RS07690 (1592510) | 1592510..1592764 | - | 255 | WP_000111487.1 | DUF3310 domain-containing protein | - |
| OCX20_RS07695 (1592764) | 1592764..1593165 | - | 402 | WP_000113977.1 | PVL family protein | - |
| OCX20_RS07700 (1593165) | 1593165..1593350 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| OCX20_RS07705 (1593363) | 1593363..1595315 | - | 1953 | WP_117219091.1 | DNA polymerase | - |
| OCX20_RS07710 (1595384) | 1595384..1595941 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| OCX20_RS07715 (1595967) | 1595967..1597133 | - | 1167 | WP_064129389.1 | DUF2800 domain-containing protein | - |
| OCX20_RS07720 (1597130) | 1597130..1597492 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| OCX20_RS07725 (1597507) | 1597507..1597830 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| OCX20_RS07730 (1597909) | 1597909..1598070 | - | 162 | WP_001285963.1 | DUF1270 family protein | - |
| OCX20_RS07735 (1598083) | 1598083..1598346 | - | 264 | WP_001124159.1 | helix-turn-helix domain-containing protein | - |
| OCX20_RS07740 (1598371) | 1598371..1598586 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| OCX20_RS07745 (1598641) | 1598641..1599006 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| OCX20_RS07750 (1598975) | 1598975..1599220 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| OCX20_RS07755 (1599276) | 1599276..1599485 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| OCX20_RS07760 (1599475) | 1599475..1599618 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| OCX20_RS07765 (1599647) | 1599647..1600423 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| OCX20_RS07770 (1600437) | 1600437..1600673 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| OCX20_RS07775 (1600825) | 1600825..1601139 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| OCX20_RS07780 (1601152) | 1601152..1601613 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| OCX20_RS07785 (1601631) | 1601631..1602215 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| OCX20_RS07790 (1602445) | 1602445..1602591 | + | 147 | WP_072433242.1 | hypothetical protein | - |
| OCX20_RS07795 (1602588) | 1602588..1603202 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| OCX20_RS07800 (1603328) | 1603328..1604533 | + | 1206 | WP_000264747.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| OCX20_RS07805 (1604576) | 1604576..1606603 | - | 2028 | WP_117219080.1 | hypothetical protein | - |
| OCX20_RS07810 (1606615) | 1606615..1607523 | - | 909 | WP_001793476.1 | DUF1672 domain-containing protein | - |
| OCX20_RS07815 (1607768) | 1607768..1609519 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| OCX20_RS07820 (1609500) | 1609500..1610225 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| OCX20_RS07825 (1610358) | 1610358..1611095 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| OCX20_RS07830 (1611088) | 1611088..1611630 | - | 543 | WP_000368657.1 | SMC-Scp complex subunit ScpB | - |
| OCX20_RS07835 (1611623) | 1611623..1612354 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| OCX20_RS07840 (1612446) | 1612446..1612952 | + | 507 | WP_001183427.1 | DUF309 domain-containing protein | - |
| OCX20_RS07845 (1613030) | 1613030..1613917 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| OCX20_RS07850 (1613965) | 1613965..1614414 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| OCX20_RS07855 (1614519) | 1614519..1615061 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| OCX20_RS07860 (1615143) | 1615143..1616051 | + | 909 | WP_001171352.1 | aldo/keto reductase | - |
| OCX20_RS07865 (1616267) | 1616267..1616515 | - | 249 | WP_000995799.1 | hypothetical protein | - |
| OCX20_RS07870 (1616531) | 1616531..1617286 | - | 756 | WP_117200966.1 | SDR family oxidoreductase | - |
| OCX20_RS07875 (1617428) | 1617428..1618243 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| OCX20_RS07880 (1618346) | 1618346..1619266 | - | 921 | WP_000454068.1 | ribonuclease Z | - |
| OCX20_RS07885 (1619579) | 1619579..1621063 | + | 1485 | WP_117200968.1 | glucose-6-phosphate dehydrogenase | - |
| OCX20_RS07890 (1621293) | 1621293..1622159 | + | 867 | WP_000382586.1 | AraC family transcriptional regulator | - |
| OCX20_RS07895 (1622241) | 1622241..1623890 | - | 1650 | WP_001041916.1 | alpha-glucosidase | - |
| OCX20_RS07900 (1623906) | 1623906..1624925 | - | 1020 | WP_000256340.1 | LacI family DNA-binding transcriptional regulator | - |
| OCX20_RS07905 (1624926) | 1624926..1625180 | - | 255 | WP_001837949.1 | hypothetical protein | - |
| OCX20_RS07910 (1625119) | 1625119..1625490 | - | 372 | WP_000413427.1 | VOC family protein | - |
| OCX20_RS07915 (1625709) | 1625709..1627115 | - | 1407 | WP_000193707.1 | NADP-dependent phosphogluconate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|